FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7727, 431 aa 1>>>pF1KB7727 431 - 431 aa - 431 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1032+/-0.000729; mu= 10.3771+/- 0.044 mean_var=114.2292+/-23.190, 0's: 0 Z-trim(112.7): 11 B-trim: 0 in 0/52 Lambda= 0.120001 statistics sampled from 13422 (13431) to 13422 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.752), E-opt: 0.2 (0.413), width: 16 Scan time: 3.280 The best scores are: opt bits E(32554) CCDS3743.1 NOCT gene_id:25819|Hs108|chr4 ( 431) 2963 523.3 1.8e-148 >>CCDS3743.1 NOCT gene_id:25819|Hs108|chr4 (431 aa) initn: 2963 init1: 2963 opt: 2963 Z-score: 2779.2 bits: 523.3 E(32554): 1.8e-148 Smith-Waterman score: 2963; 100.0% identity (100.0% similar) in 431 aa overlap (1-431:1-431) 10 20 30 40 50 60 pF1KB7 MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASPRLLAAASAASGAARSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASPRLLAAASAASGAARSC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 SRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHLEPIDPKELLEECRAVLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 SRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHLEPIDPKELLEECRAVLHT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 RPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 RPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 EEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 EEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 LQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 LQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 GCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 GCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 YTTWKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 YTTWKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCD 370 380 390 400 410 420 430 pF1KB7 FSFTEESDGLS ::::::::::: CCDS37 FSFTEESDGLS 430 431 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:46:10 2016 done: Sun Nov 6 05:46:11 2016 Total Scan time: 3.280 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]