FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6817, 162 aa 1>>>pF1KB6817 162 - 162 aa - 162 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1943+/-0.000273; mu= 13.6076+/- 0.017 mean_var=66.6362+/-13.131, 0's: 0 Z-trim(118.8): 9 B-trim: 70 in 1/53 Lambda= 0.157116 statistics sampled from 32049 (32058) to 32049 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.767), E-opt: 0.2 (0.376), width: 16 Scan time: 5.360 The best scores are: opt bits E(85289) NP_068575 (OMIM: 605384,615767) interleukin-21 iso ( 162) 1094 255.8 2.2e-68 NP_001193935 (OMIM: 605384,615767) interleukin-21 ( 153) 987 231.6 4.2e-61 >>NP_068575 (OMIM: 605384,615767) interleukin-21 isoform (162 aa) initn: 1094 init1: 1094 opt: 1094 Z-score: 1348.8 bits: 255.8 E(85289): 2.2e-68 Smith-Waterman score: 1094; 100.0% identity (100.0% similar) in 162 aa overlap (1-162:1-162) 10 20 30 40 50 60 pF1KB6 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL 70 80 90 100 110 120 130 140 150 160 pF1KB6 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS :::::::::::::::::::::::::::::::::::::::::: NP_068 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS 130 140 150 160 >>NP_001193935 (OMIM: 605384,615767) interleukin-21 isof (153 aa) initn: 1025 init1: 987 opt: 987 Z-score: 1218.0 bits: 231.6 E(85289): 4.2e-61 Smith-Waterman score: 987; 99.3% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KB6 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL 70 80 90 100 110 120 130 140 150 160 pF1KB6 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS ::::::::::::::::::::::::::. NP_001 TCPSCDSYEKKPPKEFLERFKSLLQKVSTLSFI 130 140 150 162 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:29:27 2016 done: Mon Nov 7 15:29:28 2016 Total Scan time: 5.360 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]