FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6817, 162 aa 1>>>pF1KB6817 162 - 162 aa - 162 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3232+/-0.000612; mu= 12.6233+/- 0.037 mean_var=66.8247+/-13.115, 0's: 0 Z-trim(111.8): 6 B-trim: 0 in 0/52 Lambda= 0.156894 statistics sampled from 12693 (12699) to 12693 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.39), width: 16 Scan time: 1.930 The best scores are: opt bits E(32554) CCDS3727.1 IL21 gene_id:59067|Hs108|chr4 ( 162) 1094 255.5 1e-68 CCDS75189.1 IL21 gene_id:59067|Hs108|chr4 ( 153) 987 231.3 1.9e-61 >>CCDS3727.1 IL21 gene_id:59067|Hs108|chr4 (162 aa) initn: 1094 init1: 1094 opt: 1094 Z-score: 1347.1 bits: 255.5 E(32554): 1e-68 Smith-Waterman score: 1094; 100.0% identity (100.0% similar) in 162 aa overlap (1-162:1-162) 10 20 30 40 50 60 pF1KB6 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL 70 80 90 100 110 120 130 140 150 160 pF1KB6 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS :::::::::::::::::::::::::::::::::::::::::: CCDS37 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS 130 140 150 160 >>CCDS75189.1 IL21 gene_id:59067|Hs108|chr4 (153 aa) initn: 1025 init1: 987 opt: 987 Z-score: 1216.5 bits: 231.3 E(32554): 1.9e-61 Smith-Waterman score: 987; 99.3% identity (100.0% similar) in 147 aa overlap (1-147:1-147) 10 20 30 40 50 60 pF1KB6 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MRSSPGNMERIVICLMVIFLGTLVHKSSSQGQDRHMIRMRQLIDIVDQLKNYVNDLVPEF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTNAGRRQKHRL 70 80 90 100 110 120 130 140 150 160 pF1KB6 TCPSCDSYEKKPPKEFLERFKSLLQKMIHQHLSSRTHGSEDS ::::::::::::::::::::::::::. CCDS75 TCPSCDSYEKKPPKEFLERFKSLLQKVSTLSFI 130 140 150 162 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:29:26 2016 done: Mon Nov 7 15:29:27 2016 Total Scan time: 1.930 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]