FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1147, 462 aa 1>>>pF1KE1147 462 - 462 aa - 462 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.3636+/-0.000358; mu= -4.1965+/- 0.022 mean_var=255.2414+/-54.292, 0's: 0 Z-trim(122.6): 18 B-trim: 2789 in 2/60 Lambda= 0.080278 statistics sampled from 40872 (40936) to 40872 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.48), width: 16 Scan time: 11.450 The best scores are: opt bits E(85289) NP_001135943 (OMIM: 611355) integrator complex sub ( 462) 2958 355.3 2e-97 XP_011530447 (OMIM: 611355) PREDICTED: integrator ( 462) 2958 355.3 2e-97 XP_005263205 (OMIM: 611355) PREDICTED: integrator ( 462) 2958 355.3 2e-97 XP_011530445 (OMIM: 611355) PREDICTED: integrator ( 462) 2958 355.3 2e-97 NP_065128 (OMIM: 611355) integrator complex subuni ( 462) 2958 355.3 2e-97 >>NP_001135943 (OMIM: 611355) integrator complex subunit (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 1870.0 bits: 355.3 E(85289): 2e-97 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: NP_001 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 >>XP_011530447 (OMIM: 611355) PREDICTED: integrator comp (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 1870.0 bits: 355.3 E(85289): 2e-97 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: XP_011 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 >>XP_005263205 (OMIM: 611355) PREDICTED: integrator comp (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 1870.0 bits: 355.3 E(85289): 2e-97 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: XP_005 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 >>XP_011530445 (OMIM: 611355) PREDICTED: integrator comp (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 1870.0 bits: 355.3 E(85289): 2e-97 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: XP_011 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 >>NP_065128 (OMIM: 611355) integrator complex subunit 12 (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 1870.0 bits: 355.3 E(85289): 2e-97 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_065 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: NP_065 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 462 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:20:27 2016 done: Sun Nov 6 17:20:28 2016 Total Scan time: 11.450 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]