FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1147, 462 aa 1>>>pF1KE1147 462 - 462 aa - 462 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.4016+/-0.000828; mu= 1.1110+/- 0.050 mean_var=216.9590+/-44.016, 0's: 0 Z-trim(114.5): 17 B-trim: 19 in 2/54 Lambda= 0.087073 statistics sampled from 15053 (15066) to 15053 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.463), width: 16 Scan time: 3.940 The best scores are: opt bits E(32554) CCDS3671.1 INTS12 gene_id:57117|Hs108|chr4 ( 462) 2958 383.8 2e-106 >>CCDS3671.1 INTS12 gene_id:57117|Hs108|chr4 (462 aa) initn: 2958 init1: 2958 opt: 2958 Z-score: 2024.3 bits: 383.8 E(32554): 2e-106 Smith-Waterman score: 2958; 100.0% identity (100.0% similar) in 462 aa overlap (1-462:1-462) 10 20 30 40 50 60 pF1KE1 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 MAATVNLELDPIFLKALGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 STKNISIKQEPKISSSLPSGNNNGKVLTTEKVKKEAEKRPADKMKSDITEGVDIPKKPRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 EKPETQSSPITVQSSKDLPMADLSSFEETSADDFAMEMGLACVVCRQMMVASGNQLVECQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 ECHNLYHRDCHKPQVTDKEANDPRLVWYCARCTRQMKRMAQKTQKPPQKPAPAVVSVTPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 VKDPLVKKPETKLKQETTFLAFKRTEVKTSTVISGNSSSASVSSSVTSGLTGWAAFAAKT 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 SSAGPSTAKLSSTTQNNTGKPATSSANQKPVGLTGLATSSKGGIGSKIGSNNSTTPTVPL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 KPPPPLTLGKTGLSRSVSCDNVSKVGLPSPSSLVPGSSSQLSGNGNSGTSGPSGSTTSKT 370 380 390 400 410 420 430 440 450 460 pF1KE1 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK :::::::::::::::::::::::::::::::::::::::::: CCDS36 TSESSSSPSASLKGPTSQESQLNAMKRLQMVKKKAAQKKLKK 430 440 450 460 462 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:20:26 2016 done: Sun Nov 6 17:20:26 2016 Total Scan time: 3.940 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]