FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6388, 377 aa 1>>>pF1KE6388 377 - 377 aa - 377 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.5635+/-0.000338; mu= 21.0512+/- 0.021 mean_var=61.3459+/-12.428, 0's: 0 Z-trim(114.7): 23 B-trim: 0 in 0/54 Lambda= 0.163750 statistics sampled from 24622 (24638) to 24622 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.289), width: 16 Scan time: 7.280 The best scores are: opt bits E(85289) NP_932069 (OMIM: 613366) solute carrier family 10 ( 377) 2533 606.8 2.7e-173 NP_000443 (OMIM: 601295,613291) ileal sodium/bile ( 348) 1114 271.5 2.1e-72 NP_003040 (OMIM: 182396) sodium/bile acid cotransp ( 349) 723 179.1 1.3e-44 NP_001135863 (OMIM: 312090) P3 protein isoform 2 p ( 448) 451 115.0 3.5e-25 XP_011529503 (OMIM: 312090) PREDICTED: P3 protein ( 477) 451 115.0 3.7e-25 NP_062822 (OMIM: 312090) P3 protein isoform 1 prec ( 477) 451 115.0 3.7e-25 NP_001135864 (OMIM: 312090) P3 protein isoform 1 p ( 477) 451 115.0 3.7e-25 XP_005277970 (OMIM: 312090) PREDICTED: P3 protein ( 532) 451 115.0 4e-25 XP_011529502 (OMIM: 312090) PREDICTED: P3 protein ( 532) 451 115.0 4e-25 XP_006724911 (OMIM: 312090) PREDICTED: P3 protein ( 541) 451 115.0 4e-25 XP_006724910 (OMIM: 312090) PREDICTED: P3 protein ( 570) 451 115.1 4.2e-25 >>NP_932069 (OMIM: 613366) solute carrier family 10 memb (377 aa) initn: 2533 init1: 2533 opt: 2533 Z-score: 3232.3 bits: 606.8 E(85289): 2.7e-173 Smith-Waterman score: 2533; 99.7% identity (100.0% similar) in 377 aa overlap (1-377:1-377) 10 20 30 40 50 60 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCPGGTISNVFTFWVD :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: NP_932 HIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCPGGTISNIFTFWVD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 GDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 GDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YVNYRWPKQSKIILKIGAVVGGVLLLVVAVAGVVLAKGSWNSDITLLTISFIFPLIGHVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 YVNYRWPKQSKIILKIGAVVGGVLLLVVAVAGVVLAKGSWNSDITLLTISFIFPLIGHVT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 GFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLSFTAEHLVQMLSFPLAYGLFQLID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 GFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLSFTAEHLVQMLSFPLAYGLFQLID 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTSSRETNAFLEVNEEGAITPGPPGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_932 GFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTSSRETNAFLEVNEEGAITPGPPGP 310 320 330 340 350 360 370 pF1KE6 MDCHRALEPVGHITSCE ::::::::::::::::: NP_932 MDCHRALEPVGHITSCE 370 >>NP_000443 (OMIM: 601295,613291) ileal sodium/bile acid (348 aa) initn: 1175 init1: 1069 opt: 1114 Z-score: 1421.0 bits: 271.5 E(85289): 2.1e-72 Smith-Waterman score: 1117; 47.5% identity (81.0% similar) in 326 aa overlap (30-355:30-345) 10 20 30 40 50 60 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWS : .:...: :....:.:::.::.:::.:. . NP_000 MNDPNSCVDNATVCSGASCVVPESNFNNILSVVLSTVLTILLALVMFSMGCNVEIKKFLG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 HIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCPGGTISNVFTFWVD ::.::::: ::.:::::.::.:...:...:.. :.::..:::.::::::: ::....::: NP_000 HIKRPWGICVGFLCQFGIMPLTGFILSVAFDILPLQAVVVLIIGCCPGGTASNILAYWVD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 GDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIPYQNIGITLVCLTIPVAFGV ::::::.:::::::. ::::::::. .:: : . ...:::.::: .:: :..::..:. NP_000 GDMDLSVSMTTCSTLLALGMMPLCLLIYTKMWVDSGSIVIPYDNIGTSLVALVVPVSIGM 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 YVNYRWPKQSKIILKIGAVVGGVLLLVVAVAGVVLAKGSWNSDITLLTISFIFPLIGHVT .::..::...:::::::...:..:....::.: .: ...: : :. :::. :. NP_000 FVNHKWPQKAKIILKIGSIAGAILIVLIAVVGGILYQSAWIIAPKLWIIGTIFPVAGYSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 GFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLSFTAEHLVQMLSFPLAYGLFQLID ::::: .. : ::::...::: :: :.: :..::::: :.: ...::: :..::: NP_000 GFLLARIAGLPWYRCRTVAFETGMQNTQLCSTIVQLSFTPEELNVVFTFPLIYSIFQLAF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTSSRETNAFLEVNEEGAITPGPPGP . .... : .::. :::... :. ..... . :.. : ..: :.. : NP_000 AAIFLGFYVAYKK----CHGKNKA---EIPESKENGTEPESS-FYKAN--GGFQPDEK 310 320 330 340 370 pF1KE6 MDCHRALEPVGHITSCE >>NP_003040 (OMIM: 182396) sodium/bile acid cotransporte (349 aa) initn: 696 init1: 403 opt: 723 Z-score: 921.8 bits: 179.1 E(85289): 1.3e-44 Smith-Waterman score: 723; 39.4% identity (73.3% similar) in 292 aa overlap (31-313:24-309) 10 20 30 40 50 60 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVMMGLLMFSLGCSVEIRKLWS .:...:. . :. ..:.::::..:. :. . NP_003 MEAHNASAPFNFTLPPNFGKRPTDLALSVILVFMLFFIMLSLGCTMEFSKIKA 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 HIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVLIMGCCPGGTISNVFTFWVD :. .: :.:..:. :.:.::.::..:. : :: ..:.:.:. :: :::..::::.. . NP_003 HLWKPKGLAIALVAQYGIMPLTAFVLGKVFRLKNIEALAILVCGCSPGGNLSNVFSLAMK 60 70 80 90 100 110 130 140 150 160 170 pF1KE6 GDMDLSISMTTCSTVAALGMMPLCIYLYTWS-WSLQQNLTIPYQNIGITLVCLTIPVAFG :::.::: :::::: ::::::: .:.:. . .. . . .::..: :.:: . :: ..: NP_003 GDMNLSIVMTTCSTFCALGMMPLLLYIYSRGIYDGDLKDKVPYKGIVISLVLVLIPCTIG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 VYVNYRWPKQSKIILKIGAVVGGVLLLVVAVAGVVLAKGSWNSDIT------LLTISFIF . .. . :. . ..: : .. .:: ::: .::. . ...: :.. : .. NP_003 IVLKSKRPQYMRYVIKGGMII--ILLCSVAV--TVLSAINVGKSIMFAMTPLLIATSSLM 180 190 200 210 220 240 250 260 270 280 290 pF1KE6 PLIGHVTGFLL-ALFTHQSWQRCR-TISLETGAQNIQMCITMLQLSFTAEHLVQMLSFPL :.:: . :..: ::: .. ::: :.:.::: ::.:.: :.:...: : . .. ::: NP_003 PFIGFLLGYVLSALFCLNG--RCRRTVSMETGCQNVQLCSTILNVAFPPEVIGPLFFFPL 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE6 AYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTSSRETNAFLEVNEEG : .::: .:.:..: . :.. NP_003 LYMIFQLGEGLLLIAIFWCYEKFKTPKDKTKMIYTAATTEETIPGALGNGTYKGEDCSPC 290 300 310 320 330 340 >>NP_001135863 (OMIM: 312090) P3 protein isoform 2 precu (448 aa) initn: 453 init1: 356 opt: 451 Z-score: 573.1 bits: 115.0 E(85289): 3.5e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:143-408) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. NP_001 EVLTIKNLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 120 130 140 150 160 170 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... NP_001 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 180 190 200 210 220 230 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: NP_001 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 240 250 260 270 280 290 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . NP_001 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 300 310 320 330 340 350 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: NP_001 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 360 370 380 390 400 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . NP_001 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 410 420 430 440 >>XP_011529503 (OMIM: 312090) PREDICTED: P3 protein isof (477 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.7 bits: 115.0 E(85289): 3.7e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:172-437) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. XP_011 LAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... XP_011 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 210 220 230 240 250 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: XP_011 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 260 270 280 290 300 310 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . XP_011 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 320 330 340 350 360 370 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: XP_011 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 380 390 400 410 420 430 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . XP_011 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 440 450 460 470 >>NP_062822 (OMIM: 312090) P3 protein isoform 1 precurso (477 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.7 bits: 115.0 E(85289): 3.7e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:172-437) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. NP_062 LAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... NP_062 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 210 220 230 240 250 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: NP_062 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 260 270 280 290 300 310 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . NP_062 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 320 330 340 350 360 370 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: NP_062 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 380 390 400 410 420 430 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . NP_062 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 440 450 460 470 >>NP_001135864 (OMIM: 312090) P3 protein isoform 1 precu (477 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.7 bits: 115.0 E(85289): 3.7e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:172-437) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. NP_001 LAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 150 160 170 180 190 200 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... NP_001 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 210 220 230 240 250 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: NP_001 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 260 270 280 290 300 310 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . NP_001 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 320 330 340 350 360 370 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: NP_001 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 380 390 400 410 420 430 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . NP_001 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 440 450 460 470 >>XP_005277970 (OMIM: 312090) PREDICTED: P3 protein isof (532 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.1 bits: 115.0 E(85289): 4e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:227-492) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. XP_005 LAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 200 210 220 230 240 250 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... XP_005 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 260 270 280 290 300 310 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: XP_005 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 320 330 340 350 360 370 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . XP_005 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 380 390 400 410 420 430 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: XP_005 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 440 450 460 470 480 490 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . XP_005 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 500 510 520 530 >>XP_011529502 (OMIM: 312090) PREDICTED: P3 protein isof (532 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.1 bits: 115.0 E(85289): 4e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:227-492) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. XP_011 LAPLHIQLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 200 210 220 230 240 250 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... XP_011 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 260 270 280 290 300 310 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: XP_011 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 320 330 340 350 360 370 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . XP_011 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 380 390 400 410 420 430 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: XP_011 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 440 450 460 470 480 490 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . XP_011 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 500 510 520 530 >>XP_006724911 (OMIM: 312090) PREDICTED: P3 protein isof (541 aa) initn: 453 init1: 356 opt: 451 Z-score: 572.0 bits: 115.0 E(85289): 4e-25 Smith-Waterman score: 451; 31.7% identity (63.5% similar) in 271 aa overlap (12-278:236-501) 10 20 30 40 pF1KE6 MRANCSSSSACPANSSEEELPVGLEVHGNLELVFTVVSTVM ::... : . : .. ... .. .. XP_006 EVLTIKNLVDAHEAPPTLIEERRDFCIKVSPAEDTPATLSADLAHFSENPILYLLLPLIF 210 220 230 240 250 260 50 60 70 80 90 100 pF1KE6 MGLLMFSLGCSVEIRKLWSHIRRPWGIAVGLLCQFGLMPFTAYLLAISFSLKPVQAIAVL .. :.::.::.. : . .. : . .::: :: .::. :.:.: : : . :.... XP_006 VN--KCSFGCKVELEVLKGLMQSPQPMLLGLLGQFLVMPLYAFLMAKVFMLPKALALGLI 270 280 290 300 310 320 110 120 130 140 150 160 pF1KE6 IMGCCPGGTISNVFTFWVDGDMDLSISMTTCSTVAALGMMPLCIYLYTWSWSLQQNLTIP : ::: : .:.. . ::. :.:::: ::::: :..:: .:. :....: .: XP_006 ITCSSPGGGGSYLFSLLLGGDVTLAISMTFLSTVAATGFLPLSSAIYSRLLSIHETLHVP 330 340 350 360 370 380 170 180 190 200 210 pF1KE6 YQNIGITLVCLTIPVAFGVYVNYRWPKQSKIILKIGAVVGGVLLL----VVAVAGVVLAK ..: ::. ..::.: :: .. . :: :...:.. . :::: .. :: . XP_006 ISKILGTLLFIAIPIAVGVLIKSKLPKFSQLLLQVVKPFSFVLLLGGLFLAYRMGVFILA 390 400 410 420 430 440 220 230 240 250 260 270 pF1KE6 GSWNSDITLLTISFIFPLIGHVTGFLLALFTHQSWQRCRTISLETGAQNIQMCITMLQLS : . .. ... ::.: ..:. :: . . ::.:.:.:.:: . ..::::: XP_006 GI---RLPIVLVGITVPLVGLLVGYCLATCLKLPVAQRRTVSIEVGVQNSLLALAMLQLS 450 460 470 480 490 500 280 290 300 310 320 330 pF1KE6 FTAEHLVQMLSFPLAYGLFQLIDGFLIVAAYQTYKRRLKNKHGKKNSGCTEVCHTRKSTS . XP_006 LRRLQADYASQAPFIVALSGTSEMLALVIGHFIYSSLFPVP 510 520 530 540 377 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:49:36 2016 done: Tue Nov 8 12:49:37 2016 Total Scan time: 7.280 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]