FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6524, 130 aa 1>>>pF1KE6524 130 - 130 aa - 130 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4626+/-0.000554; mu= 7.3552+/- 0.034 mean_var=108.1794+/-21.385, 0's: 0 Z-trim(117.5): 3 B-trim: 75 in 2/48 Lambda= 0.123311 statistics sampled from 18200 (18203) to 18200 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.856), E-opt: 0.2 (0.559), width: 16 Scan time: 1.730 The best scores are: opt bits E(32554) CCDS3569.1 C4orf26 gene_id:152816|Hs108|chr4 ( 130) 976 182.4 6.6e-47 CCDS75142.1 C4orf26 gene_id:152816|Hs108|chr4 ( 85) 512 99.8 3.3e-22 >>CCDS3569.1 C4orf26 gene_id:152816|Hs108|chr4 (130 aa) initn: 976 init1: 976 opt: 976 Z-score: 955.6 bits: 182.4 E(32554): 6.6e-47 Smith-Waterman score: 976; 100.0% identity (100.0% similar) in 130 aa overlap (1-130:1-130) 10 20 30 40 50 60 pF1KE6 MARRHCFSYWLLVCWLVVTVAEGQEEVFTPPGDSQNNADATDCQIFTLTPPPAPRSPVTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MARRHCFSYWLLVCWLVVTVAEGQEEVFTPPGDSQNNADATDCQIFTLTPPPAPRSPVTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQPITKTPRCPFHFFPRRPRIHFRFPNRPFVPSRCNHRFPFQPFYWPHRYLTYRYFPRRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 AQPITKTPRCPFHFFPRRPRIHFRFPNRPFVPSRCNHRFPFQPFYWPHRYLTYRYFPRRR 70 80 90 100 110 120 130 pF1KE6 LQRGSSSEES :::::::::: CCDS35 LQRGSSSEES 130 >>CCDS75142.1 C4orf26 gene_id:152816|Hs108|chr4 (85 aa) initn: 538 init1: 494 opt: 512 Z-score: 512.1 bits: 99.8 E(32554): 3.3e-22 Smith-Waterman score: 512; 93.6% identity (94.9% similar) in 78 aa overlap (1-78:1-74) 10 20 30 40 50 60 pF1KE6 MARRHCFSYWLLVCWLVVTVAEGQEEVFTPPGDSQNNADATDCQIFTLTPPPAPRSPVTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MARRHCFSYWLLVCWLVVTVAEGQEEVFTPPGDSQNNADATDCQIFTLTPPPAPRSPVTR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AQPITKTPRCPFHFFPRRPRIHFRFPNRPFVPSRCNHRFPFQPFYWPHRYLTYRYFPRRR ::::::::: .:::: CCDS75 AQPITKTPR----YFPRRRLQRGSSSEES 70 80 130 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:05:22 2016 done: Tue Nov 8 14:05:22 2016 Total Scan time: 1.730 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]