FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5418, 318 aa 1>>>pF1KE5418 318 - 318 aa - 318 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9754+/-0.000834; mu= 17.5935+/- 0.050 mean_var=63.7604+/-13.523, 0's: 0 Z-trim(106.8): 25 B-trim: 21 in 1/50 Lambda= 0.160620 statistics sampled from 9178 (9191) to 9178 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.642), E-opt: 0.2 (0.282), width: 16 Scan time: 2.090 The best scores are: opt bits E(32554) CCDS3498.1 SRD5A3 gene_id:79644|Hs108|chr4 ( 318) 2207 520.0 9.7e-148 >>CCDS3498.1 SRD5A3 gene_id:79644|Hs108|chr4 (318 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 2765.9 bits: 520.0 E(32554): 9.7e-148 Smith-Waterman score: 2207; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318) 10 20 30 40 50 60 pF1KE5 MAPWAEAEHSALNPLRAVWLTLTAAFLLTLLLQLLPPGLLPGCAIFQDLIRYGKTKCGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MAPWAEAEHSALNPLRAVWLTLTAAFLLTLLLQLLPPGLLPGCAIFQDLIRYGKTKCGEP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 SRPAACRAFDVPKRYFSHFYIISVLWNGFLLWCLTQSLFLGAPFPSWLHGLLRILGAAQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SRPAACRAFDVPKRYFSHFYIISVLWNGFLLWCLTQSLFLGAPFPSWLHGLLRILGAAQF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 QGGELALSAFLVLVFLWLHSLRRLFECLYVSVFSNVMIHVVQYCFGLVYYVLVGLTVLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QGGELALSAFLVLVFLWLHSLRRLFECLYVSVFSNVMIHVVQYCFGLVYYVLVGLTVLSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VPMDGRNAYITGKNLLMQARWFHILGMMMFIWSSAHQYKCHVILGNLRKNKAGVVIHCNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VPMDGRNAYITGKNLLMQARWFHILGMMMFIWSSAHQYKCHVILGNLRKNKAGVVIHCNH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 RIPFGDWFEYVSSPNYLAELMIYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RIPFGDWFEYVSSPNYLAELMIYVSMAVTFGFHNLTWWLVVTNVFFNQALSAFLSHQFYK 250 260 270 280 290 300 310 pF1KE5 SKFVSYPKHRKAFLPFLF :::::::::::::::::: CCDS34 SKFVSYPKHRKAFLPFLF 310 318 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:33:49 2016 done: Tue Nov 8 00:33:49 2016 Total Scan time: 2.090 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]