FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4129, 526 aa 1>>>pF1KE4129 526 - 526 aa - 526 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3201+/-0.000969; mu= 18.7702+/- 0.059 mean_var=73.2638+/-14.413, 0's: 0 Z-trim(105.3): 29 B-trim: 0 in 0/51 Lambda= 0.149841 statistics sampled from 8329 (8347) to 8329 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.256), width: 16 Scan time: 3.410 The best scores are: opt bits E(32554) CCDS3439.1 TBC1D19 gene_id:55296|Hs108|chr4 ( 526) 3446 754.5 6.5e-218 CCDS75115.1 TBC1D19 gene_id:55296|Hs108|chr4 ( 461) 2823 619.8 2e-177 >>CCDS3439.1 TBC1D19 gene_id:55296|Hs108|chr4 (526 aa) initn: 3446 init1: 3446 opt: 3446 Z-score: 4025.7 bits: 754.5 E(32554): 6.5e-218 Smith-Waterman score: 3446; 100.0% identity (100.0% similar) in 526 aa overlap (1-526:1-526) 10 20 30 40 50 60 pF1KE4 MLQEESDLSLIIAQIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MLQEESDLSLIIAQIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLEVLINLRNPNYENGDSLSFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLEVLINLRNPNYENGDSLSFRT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 HLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQVPPELFENEHVRIGQKVLAEQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 HLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQVPPELFENEHVRIGQKVLAEQD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 SAAAQQYIRQGSPTALRAELWALILNISSQPEDVLYYEQLKTNVIQHDLLVDSLIYKDVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SAAAQQYIRQGSPTALRAELWALILNISSQPEDVLYYEQLKTNVIQHDLLVDSLIYKDVK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 NGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFET 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 LLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVL 430 440 450 460 470 480 490 500 510 520 pF1KE4 AAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT :::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT 490 500 510 520 >>CCDS75115.1 TBC1D19 gene_id:55296|Hs108|chr4 (461 aa) initn: 2823 init1: 2823 opt: 2823 Z-score: 3298.7 bits: 619.8 E(32554): 2e-177 Smith-Waterman score: 2875; 87.6% identity (87.6% similar) in 526 aa overlap (1-526:1-461) 10 20 30 40 50 60 pF1KE4 MLQEESDLSLIIAQIVQKLKGSNLYSQLERQAWASLQRPEIKLESLKEDIKEFFKISGWE ::::::::::::::::::::::::::::::::: CCDS75 MLQEESDLSLIIAQIVQKLKGSNLYSQLERQAW--------------------------- 10 20 30 70 80 90 100 110 120 pF1KE4 KKLQNAVYSELSVFPLPSHPAAPPEHLKEPLVYMRKAQGSWEKRILKSLNSMCTELSIPL :::::::::::::::::::::: CCDS75 --------------------------------------GSWEKRILKSLNSMCTELSIPL 40 50 130 140 150 160 170 180 pF1KE4 ARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLEVLINLRNPNYENGDSLSFRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 ARKRPVGEQKELLNKWNEMGTDEPDLSLFRPVYAPKDFLEVLINLRNPNYENGDSLSFRT 60 70 80 90 100 110 190 200 210 220 230 240 pF1KE4 HLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQVPPELFENEHVRIGQKVLAEQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 HLGLIQVPLKVKDIPELKECFVELGLNIGQLGIDDSTQVPPELFENEHVRIGQKVLAEQD 120 130 140 150 160 170 250 260 270 280 290 300 pF1KE4 SAAAQQYIRQGSPTALRAELWALILNISSQPEDVLYYEQLKTNVIQHDLLVDSLIYKDVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SAAAQQYIRQGSPTALRAELWALILNISSQPEDVLYYEQLKTNVIQHDLLVDSLIYKDVK 180 190 200 210 220 230 310 320 330 340 350 360 pF1KE4 LTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LTASNDDYYFVFEDYLYQVLLCFSRDTSVLSHFAFNSASPPKSYIRGKLGLEEYAVFYPP 240 250 260 270 280 290 370 380 390 400 410 420 pF1KE4 NGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 NGVIPFHGFSMYVAPLCFLYHEPSKLYQIFREMYVRFFFRLHSISSHPSGIVSLCLLFET 300 310 320 330 340 350 430 440 450 460 470 480 pF1KE4 LLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LLQTYLPQLFYHLREIGAQPLRISFKWMVRAFSGYLATDQLLLLWDRILGYNSLEILAVL 360 370 380 390 400 410 490 500 510 520 pF1KE4 AAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT :::::::::::::::::::::::::::::::::::::::::::::: CCDS75 AAAVFAFRAVNLMEVTSLAAAEAVLADLSTLKVMPLLQIFLFATVT 420 430 440 450 460 526 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:51:44 2016 done: Sun Nov 6 01:51:44 2016 Total Scan time: 3.410 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]