FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3061, 216 aa 1>>>pF1KE3061 216 - 216 aa - 216 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5555+/-0.000615; mu= 14.7373+/- 0.038 mean_var=90.3214+/-17.932, 0's: 0 Z-trim(113.9): 3 B-trim: 87 in 1/52 Lambda= 0.134952 statistics sampled from 14538 (14539) to 14538 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.8), E-opt: 0.2 (0.447), width: 16 Scan time: 2.160 The best scores are: opt bits E(32554) CCDS3423.1 DCAF16 gene_id:54876|Hs108|chr4 ( 216) 1487 298.3 2.4e-81 >>CCDS3423.1 DCAF16 gene_id:54876|Hs108|chr4 (216 aa) initn: 1487 init1: 1487 opt: 1487 Z-score: 1574.0 bits: 298.3 E(32554): 2.4e-81 Smith-Waterman score: 1487; 99.5% identity (99.5% similar) in 216 aa overlap (1-216:1-216) 10 20 30 40 50 60 pF1KE3 MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 KYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VPPFQKPLISPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCG :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 VPPFQKPLTSPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCG 130 140 150 160 170 180 190 200 210 pF1KE3 WLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL :::::::::::::::::::::::::::::::::::: CCDS34 WLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL 190 200 210 216 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:04:51 2016 done: Sun Nov 6 06:04:52 2016 Total Scan time: 2.160 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]