FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1849, 365 aa 1>>>pF1KE1849 365 - 365 aa - 365 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2763+/-0.000649; mu= 17.6648+/- 0.039 mean_var=76.9396+/-15.413, 0's: 0 Z-trim(111.9): 7 B-trim: 12 in 1/51 Lambda= 0.146217 statistics sampled from 12765 (12766) to 12765 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.392), width: 16 Scan time: 2.390 The best scores are: opt bits E(32554) CCDS3402.2 TRMT44 gene_id:152992|Hs108|chr4 ( 757) 2593 556.1 3.5e-158 >>CCDS3402.2 TRMT44 gene_id:152992|Hs108|chr4 (757 aa) initn: 2593 init1: 2593 opt: 2593 Z-score: 2953.4 bits: 556.1 E(32554): 3.5e-158 Smith-Waterman score: 2593; 100.0% identity (100.0% similar) in 365 aa overlap (1-365:393-757) 10 20 30 pF1KE1 MYGPQTQLEEDAITPNDKTLFPDVDWLIGN :::::::::::::::::::::::::::::: CCDS34 GCGNGLLVHILSSEGHPGRGIDVRRRKIWDMYGPQTQLEEDAITPNDKTLFPDVDWLIGN 370 380 390 400 410 420 40 50 60 70 80 90 pF1KE1 HSDELTPWIPVIAARSSYNCRFFVLPCCFFDFIGRYSRRQSKKTQYREYLDFIKEVGFTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 HSDELTPWIPVIAARSSYNCRFFVLPCCFFDFIGRYSRRQSKKTQYREYLDFIKEVGFTC 430 440 450 460 470 480 100 110 120 130 140 150 pF1KE1 GFHVDEDCLRIPSTKRVCLVGKSRTYPSSREASVDEKRTQYIKSRRGCPVSPPGWELSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GFHVDEDCLRIPSTKRVCLVGKSRTYPSSREASVDEKRTQYIKSRRGCPVSPPGWELSPS 490 500 510 520 530 540 160 170 180 190 200 210 pF1KE1 PRWVAAGSAGHCDGQQALDARVGCVTRAWAAEHGAGPQAEGPWLPGFHPREKAERVRNCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PRWVAAGSAGHCDGQQALDARVGCVTRAWAAEHGAGPQAEGPWLPGFHPREKAERVRNCA 550 560 570 580 590 600 220 230 240 250 260 270 pF1KE1 ALPRDFIDQVVLQVANLLLGGKQLNTRSSRNGSLKTWNGGESLSLAEVANELDTETLRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ALPRDFIDQVVLQVANLLLGGKQLNTRSSRNGSLKTWNGGESLSLAEVANELDTETLRRL 610 620 630 640 650 660 280 290 300 310 320 330 pF1KE1 KRECGGLQTLLRNSHQVFQVVNGRVHIRDWREETLWKTKQPEAKQRLLSEACKTRLCWFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KRECGGLQTLLRNSHQVFQVVNGRVHIRDWREETLWKTKQPEAKQRLLSEACKTRLCWFF 670 680 690 700 710 720 340 350 360 pF1KE1 MHHPDGCALSTDCCPFAHGPAELRPPRTTPRKKIS ::::::::::::::::::::::::::::::::::: CCDS34 MHHPDGCALSTDCCPFAHGPAELRPPRTTPRKKIS 730 740 750 365 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:33:36 2016 done: Sun Nov 6 17:33:36 2016 Total Scan time: 2.390 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]