FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1902, 429 aa 1>>>pF1KE1902 429 - 429 aa - 429 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.9467+/-0.000406; mu= 2.2293+/- 0.025 mean_var=286.3379+/-56.987, 0's: 0 Z-trim(120.9): 48 B-trim: 83 in 1/55 Lambda= 0.075794 statistics sampled from 36715 (36771) to 36715 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.431), width: 16 Scan time: 10.760 The best scores are: opt bits E(85289) NP_077285 (OMIM: 610669) TNFAIP3-interacting prote ( 429) 2854 325.4 1.7e-88 NP_001154999 (OMIM: 610669) TNFAIP3-interacting pr ( 322) 2169 250.4 4.9e-66 NP_001278945 (OMIM: 610669) TNFAIP3-interacting pr ( 346) 1423 168.9 1.9e-41 >>NP_077285 (OMIM: 610669) TNFAIP3-interacting protein 2 (429 aa) initn: 2854 init1: 2854 opt: 2854 Z-score: 1709.8 bits: 325.4 E(85289): 1.7e-88 Smith-Waterman score: 2854; 100.0% identity (100.0% similar) in 429 aa overlap (1-429:1-429) 10 20 30 40 50 60 pF1KE1 MSRDPGSGGWEEAPRAAAALCTLYHEAGQRLRRLQDQLAARDALIARLRARLAALEGDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 MSRDPGSGGWEEAPRAAAALCTLYHEAGQRLRRLQDQLAARDALIARLRARLAALEGDAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PSLVDALLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHERE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 PSLVDALLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHERE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEVVLLRRSMAEGERARAASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 KEVVLLRRSMAEGERARAASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NVGERSPDQSEHTDGHTSVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 NVGERSPDQSEHTDGHTSVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LHAQLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 LHAQLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QQILAYKDDFMSERADRERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 QQILAYKDDFMSERADRERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 YLAADALELMVPGGWRPGTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_077 YLAADALELMVPGGWRPGTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEEL 370 380 390 400 410 420 pF1KE1 LRHVAECCQ ::::::::: NP_077 LRHVAECCQ >>NP_001154999 (OMIM: 610669) TNFAIP3-interacting protei (322 aa) initn: 2169 init1: 2169 opt: 2169 Z-score: 1306.5 bits: 250.4 E(85289): 4.9e-66 Smith-Waterman score: 2169; 100.0% identity (100.0% similar) in 322 aa overlap (108-429:1-322) 80 90 100 110 120 130 pF1KE1 LRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLLRRSMAEGERAR :::::::::::::::::::::::::::::: NP_001 MQQLLSQPQHEREKEVVLLRRSMAEGERAR 10 20 30 140 150 160 170 180 190 pF1KE1 AASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQRNVGERSPDQSEHTDGHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQRNVGERSPDQSEHTDGHT 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE1 SVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRGLHAQLRGLQIPHEPELM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRGLHAQLRGLQIPHEPELM 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE1 RKEISRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLEQQILAYKDDFMSERADR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RKEISRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLEQQILAYKDDFMSERADR 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE1 ERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAKYLAADALELMVPGGWRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAKYLAADALELMVPGGWRP 220 230 240 250 260 270 380 390 400 410 420 pF1KE1 GTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEELLRHVAECCQ :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEELLRHVAECCQ 280 290 300 310 320 >>NP_001278945 (OMIM: 610669) TNFAIP3-interacting protei (346 aa) initn: 1453 init1: 1421 opt: 1423 Z-score: 865.3 bits: 168.9 E(85289): 1.9e-41 Smith-Waterman score: 2138; 80.7% identity (80.7% similar) in 429 aa overlap (1-429:1-346) 10 20 30 40 50 60 pF1KE1 MSRDPGSGGWEEAPRAAAALCTLYHEAGQRLRRLQDQLAARDALIARLRARLAALEGDAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSRDPGSGGWEEAPRAAAALCTLYHEAGQRLRRLQDQLAARDALIARLRARLAALEGDAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PSLVDALLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHERE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PSLVDALLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHERE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEVVLLRRSMAEGERARAASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KEVVLLRRSMAEGERARAASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 NVGERSPDQSEHTDGHTSVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRG ::::::::::::::::::::::::::::::::::::::: NP_001 NVGERSPDQSEHTDGHTSVQSVIEKLQEENRLLKQKVTH--------------------- 190 200 210 250 260 270 280 290 300 pF1KE1 LHAQLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLE NP_001 ------------------------------------------------------------ 310 320 330 340 350 360 pF1KE1 QQILAYKDDFMSERADRERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 --ILAYKDDFMSERADRERAQSRIQELEEKVASLLHQVSWRQDSREPDAGRIHAGSKTAK 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE1 YLAADALELMVPGGWRPGTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YLAADALELMVPGGWRPGTGSQQPEPPAEGGHPGAAQRGQGDLQCPHCLQCFSDEQGEEL 280 290 300 310 320 330 pF1KE1 LRHVAECCQ ::::::::: NP_001 LRHVAECCQ 340 429 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:34:13 2016 done: Sun Nov 6 17:34:14 2016 Total Scan time: 10.760 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]