FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6170, 69 aa 1>>>pF1KE6170 69 - 69 aa - 69 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3578+/-0.000226; mu= 6.9574+/- 0.014 mean_var=62.9555+/-12.313, 0's: 0 Z-trim(122.9): 2 B-trim: 0 in 0/54 Lambda= 0.161643 statistics sampled from 41736 (41738) to 41736 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.845), E-opt: 0.2 (0.489), width: 16 Scan time: 3.160 The best scores are: opt bits E(85289) NP_009031 (OMIM: 601519) ATP synthase subunit e, m ( 69) 435 108.6 8.2e-25 >>NP_009031 (OMIM: 601519) ATP synthase subunit e, mitoc (69 aa) initn: 435 init1: 435 opt: 435 Z-score: 566.5 bits: 108.6 E(85289): 8.2e-25 Smith-Waterman score: 435; 100.0% identity (100.0% similar) in 69 aa overlap (1-69:1-69) 10 20 30 40 50 60 pF1KE6 MVPPVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_009 MVPPVQVSPLIKLGRYSALFLGVAYGATRYNYLKPRAEEERRIAAEEKKKQDELKRIARE 10 20 30 40 50 60 pF1KE6 LAEDDSILK ::::::::: NP_009 LAEDDSILK 69 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:02:40 2016 done: Tue Nov 8 10:02:41 2016 Total Scan time: 3.160 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]