FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB0402, 644 aa 1>>>pF1KB0402 644 - 644 aa - 644 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6737+/-0.00092; mu= 13.5047+/- 0.056 mean_var=110.7395+/-21.528, 0's: 0 Z-trim(108.8): 36 B-trim: 0 in 0/51 Lambda= 0.121877 statistics sampled from 10456 (10482) to 10456 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.322), width: 16 Scan time: 2.170 The best scores are: opt bits E(32554) CCDS43183.1 KNG1 gene_id:3827|Hs108|chr3 ( 644) 4458 795.0 0 CCDS3281.1 KNG1 gene_id:3827|Hs108|chr3 ( 427) 2692 484.4 1.4e-136 CCDS54695.1 KNG1 gene_id:3827|Hs108|chr3 ( 391) 1247 230.3 3.9e-60 >>CCDS43183.1 KNG1 gene_id:3827|Hs108|chr3 (644 aa) initn: 4458 init1: 4458 opt: 4458 Z-score: 4241.3 bits: 795.0 E(32554): 0 Smith-Waterman score: 4458; 100.0% identity (100.0% similar) in 644 aa overlap (1-644:1-644) 10 20 30 40 50 60 pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVSPPHTSMAPAQDEERDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVSPPHTSMAPAQDEERDSG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB0 KEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGLGHGHKFKLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGLGHGHKFKLD 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB0 DDLEHQGGHVLDHGHKHKHGHGHGKHKNKGKKNGKHNGWKTEHLASSSEDSTTPSAQTQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DDLEHQGGHVLDHGHKHKHGHGHGKHKNKGKKNGKHNGWKTEHLASSSEDSTTPSAQTQE 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB0 KTEGPTPIPSLAKPGVTVTFSDFQDSDLIATMMPPISPAPIQSDDDWIPDIQIDPNGLSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KTEGPTPIPSLAKPGVTVTFSDFQDSDLIATMMPPISPAPIQSDDDWIPDIQIDPNGLSF 550 560 570 580 590 600 610 620 630 640 pF1KB0 NPISDFPDTTSPKCPGRPWKSVSEINPTTQMKESYYFDLTDGLS :::::::::::::::::::::::::::::::::::::::::::: CCDS43 NPISDFPDTTSPKCPGRPWKSVSEINPTTQMKESYYFDLTDGLS 610 620 630 640 >>CCDS3281.1 KNG1 gene_id:3827|Hs108|chr3 (427 aa) initn: 2719 init1: 2692 opt: 2692 Z-score: 2565.7 bits: 484.4 E(32554): 1.4e-136 Smith-Waterman score: 2702; 95.5% identity (96.9% similar) in 425 aa overlap (1-416:1-425) 10 20 30 40 50 60 pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW 310 320 330 340 350 360 370 380 390 400 410 pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVS---------PPHTSMAP ::::::::::::::::::::::::::::::::::::::::: ::... : CCDS32 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTSHLRSCEYKGRPPKAGAEP 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB0 AQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGL :...: CCDS32 ASEREVS >>CCDS54695.1 KNG1 gene_id:3827|Hs108|chr3 (391 aa) initn: 1274 init1: 1247 opt: 1247 Z-score: 1193.1 bits: 230.3 E(32554): 3.9e-60 Smith-Waterman score: 2373; 87.1% identity (88.5% similar) in 425 aa overlap (1-416:1-389) 10 20 30 40 50 60 pF1KB0 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MKLITILFLCSRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRIT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB0 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 EATKTVGSDTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB0 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 VATQTCQITPAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB0 EVKRAQRQVVAGLNFRITYSIVQTNCSKENFLFLTPDCKSLWNGDTGECTDNAYIDIQLR :::::::: :::::::::::::::: CCDS54 EVKRAQRQ------------------------------------DTGECTDNAYIDIQLR 190 200 250 260 270 280 290 300 pF1KB0 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 IASFSQNCDIYPGKDFVQPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFK 210 220 230 240 250 260 310 320 330 340 350 360 pF1KB0 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 IDNVKKARVQVVAGKKYFIDFVARETTCSKESNEELTESCETKKLGQSLDCNAEVYVVPW 270 280 290 300 310 320 370 380 390 400 410 pF1KB0 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTVS---------PPHTSMAP ::::::::::::::::::::::::::::::::::::::::: ::... : CCDS54 EKKIYPTVNCQPLGMISLMKRPPGFSPFRSSRIGEIKEETTSHLRSCEYKGRPPKAGAEP 330 340 350 360 370 380 420 430 440 450 460 470 pF1KB0 AQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQHGL :...: CCDS54 ASEREVS 390 644 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:37:21 2016 done: Sun Nov 6 17:37:21 2016 Total Scan time: 2.170 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]