FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5086, 79 aa 1>>>pF1KE5086 79 - 79 aa - 79 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.3870+/-0.000244; mu= 12.3074+/- 0.015 mean_var=50.6233+/-10.071, 0's: 0 Z-trim(121.5): 2 B-trim: 402 in 1/53 Lambda= 0.180260 statistics sampled from 38084 (38086) to 38084 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.447), width: 16 Scan time: 4.080 The best scores are: opt bits E(85289) NP_150284 (OMIM: 608721) calcium/calmodulin-depend ( 79) 538 146.3 4.7e-36 NP_061054 (OMIM: 614986) calcium/calmodulin-depend ( 78) 352 98.0 1.7e-21 >>NP_150284 (OMIM: 608721) calcium/calmodulin-dependent (79 aa) initn: 538 init1: 538 opt: 538 Z-score: 768.2 bits: 146.3 E(85289): 4.7e-36 Smith-Waterman score: 538; 100.0% identity (100.0% similar) in 79 aa overlap (1-79:1-79) 10 20 30 40 50 60 pF1KE5 MSEILPYSEDKMGRFGADPEGSDLSFSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_150 MSEILPYSEDKMGRFGADPEGSDLSFSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVVIE 10 20 30 40 50 60 70 pF1KE5 DDRIDDVLKGMGEKPPSGV ::::::::::::::::::: NP_150 DDRIDDVLKGMGEKPPSGV 70 >>NP_061054 (OMIM: 614986) calcium/calmodulin-dependent (78 aa) initn: 296 init1: 296 opt: 352 Z-score: 506.9 bits: 98.0 E(85289): 1.7e-21 Smith-Waterman score: 352; 65.4% identity (87.7% similar) in 81 aa overlap (1-79:1-78) 10 20 30 40 50 pF1KE5 MSEILPYSEDKMGRFGADPEGSDLS--FSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVV :::.:::...:.. .: .:.:.. :::::::::.::...: :::::::::::.:::: NP_061 MSEVLPYGDEKLSPYG---DGGDVGQIFSCRLQDTNNFFGAGQNKRPPKLGQIGRSKRVV 10 20 30 40 50 60 70 pF1KE5 IEDDRIDDVLKGMGEKPPSGV :::::::::::.: .: : :: NP_061 IEDDRIDDVLKNMTDKAPPGV 60 70 79 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:53:35 2016 done: Tue Nov 8 04:53:36 2016 Total Scan time: 4.080 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]