FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5086, 79 aa 1>>>pF1KE5086 79 - 79 aa - 79 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6935+/-0.000461; mu= 10.4828+/- 0.028 mean_var=49.3974+/- 9.726, 0's: 0 Z-trim(114.8): 3 B-trim: 0 in 0/51 Lambda= 0.182483 statistics sampled from 15318 (15320) to 15318 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.857), E-opt: 0.2 (0.471), width: 16 Scan time: 1.280 The best scores are: opt bits E(32554) CCDS3257.1 CAMK2N2 gene_id:94032|Hs108|chr3 ( 79) 538 148.0 5.7e-37 CCDS207.1 CAMK2N1 gene_id:55450|Hs108|chr1 ( 78) 352 99.0 3.1e-22 >>CCDS3257.1 CAMK2N2 gene_id:94032|Hs108|chr3 (79 aa) initn: 538 init1: 538 opt: 538 Z-score: 777.3 bits: 148.0 E(32554): 5.7e-37 Smith-Waterman score: 538; 100.0% identity (100.0% similar) in 79 aa overlap (1-79:1-79) 10 20 30 40 50 60 pF1KE5 MSEILPYSEDKMGRFGADPEGSDLSFSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVVIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MSEILPYSEDKMGRFGADPEGSDLSFSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVVIE 10 20 30 40 50 60 70 pF1KE5 DDRIDDVLKGMGEKPPSGV ::::::::::::::::::: CCDS32 DDRIDDVLKGMGEKPPSGV 70 >>CCDS207.1 CAMK2N1 gene_id:55450|Hs108|chr1 (78 aa) initn: 296 init1: 296 opt: 352 Z-score: 512.7 bits: 99.0 E(32554): 3.1e-22 Smith-Waterman score: 352; 65.4% identity (87.7% similar) in 81 aa overlap (1-79:1-78) 10 20 30 40 50 pF1KE5 MSEILPYSEDKMGRFGADPEGSDLS--FSCRLQDTNSFFAGNQAKRPPKLGQIGRAKRVV :::.:::...:.. .: .:.:.. :::::::::.::...: :::::::::::.:::: CCDS20 MSEVLPYGDEKLSPYG---DGGDVGQIFSCRLQDTNNFFGAGQNKRPPKLGQIGRSKRVV 10 20 30 40 50 60 70 pF1KE5 IEDDRIDDVLKGMGEKPPSGV :::::::::::.: .: : :: CCDS20 IEDDRIDDVLKNMTDKAPPGV 60 70 79 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:53:35 2016 done: Tue Nov 8 04:53:35 2016 Total Scan time: 1.280 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]