FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1273, 696 aa 1>>>pF1KE1273 696 - 696 aa - 696 aa Library: human.CCDS.faa 18921897 residues in 33420 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.8503+/-0.00126; mu= -18.7343+/- 0.075 mean_var=488.1949+/-101.903, 0's: 0 Z-trim(112.5): 74 B-trim: 560 in 1/52 Lambda= 0.058047 statistics sampled from 13350 (13403) to 13350 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.401), width: 16 Scan time: 1.990 The best scores are: opt bits E(33420) CCDS3204.1 GOLIM4 gene_id:27333|Hs109|chr3 ( 696) 4608 400.9 3.3e-111 CCDS77854.1 GOLIM4 gene_id:27333|Hs109|chr3 ( 668) 3225 285.1 2.4e-76 >>CCDS3204.1 GOLIM4 gene_id:27333|Hs109|chr3 (696 aa) initn: 4608 init1: 4608 opt: 4608 Z-score: 2110.1 bits: 400.9 E(33420): 3.3e-111 Smith-Waterman score: 4608; 100.0% identity (100.0% similar) in 696 aa overlap (1-696:1-696) 10 20 30 40 50 60 pF1KE1 MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALNVQHQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALNVQHQM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHEAVPGRAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHEAVPGRAE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 DTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 DTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 HDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 HDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 VEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQAELEEGRPQHQEQLRQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 VEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQAELEEGRPQHQEQLRQQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 AHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 AHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEA 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 DRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 DRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 NPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNAEETYGENDENTDDKNNDGEEQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 NPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNAEETYGENDENTDDKNNDGEEQEV 610 620 630 640 650 660 670 680 690 pF1KE1 RDDNRPKGREEHYEEEEEEEEDGAAVAEKSHRRAEM :::::::::::::::::::::::::::::::::::: CCDS32 RDDNRPKGREEHYEEEEEEEEDGAAVAEKSHRRAEM 670 680 690 >>CCDS77854.1 GOLIM4 gene_id:27333|Hs109|chr3 (668 aa) initn: 3178 init1: 3178 opt: 3225 Z-score: 1484.4 bits: 285.1 E(33420): 2.4e-76 Smith-Waterman score: 4369; 96.0% identity (96.0% similar) in 696 aa overlap (1-696:1-668) 10 20 30 40 50 60 pF1KE1 MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MGNGMCSRKQKRIFQTLLLLTVVFGFLYGAMLYYELQTQLRKAEAVALKYQQHQESLSAQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALNVQHQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LQVVYEHRSRLEKSLQKERLEHKKAKEDFLVYKLEAQETLNKGRQDSNSRYSALNVQHQM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LKSQHEELKKQHSDLEEEHRKQGEDFSRTFNDHKQKYLQLQQEKEQELSKLKETVYNLRE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ENRQLRKAHQDIHTQLQDVKQQHKNLLSEHEQLVVTLEDHKSALAAAQTQVAEYKQLKDT :::::::::::::::::::: :::::::::::: CCDS77 ENRQLRKAHQDIHTQLQDVK----------------------------TQVAEYKQLKDT 190 200 210 250 260 270 280 290 300 pF1KE1 LNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHEAVPGRAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LNRIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHEAVPGRAE 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE1 DTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DTKLYAPTHKEAEFQAPPEPIQQEVERREPEEHQVEEEHRKALEEEEMEQVGQAEHLEEE 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE1 HDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 HDPSPEEQDREWKEQHEQREAANLLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQ 340 350 360 370 380 390 430 440 450 460 470 480 pF1KE1 VEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQAELEEGRPQHQEQLRQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 VEEAQQLREHQEALHQQRLQGHLLRQQEQQQQQVAREMALQRQAELEEGRPQHQEQLRQQ 400 410 420 430 440 450 490 500 510 520 530 540 pF1KE1 AHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 AHYDAMDNDIVQGAEDQGIQGEEGAYERDNQHQDEAEGDPGNRHEPREQGPREADPESEA 460 470 480 490 500 510 550 560 570 580 590 600 pF1KE1 DRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 DRAAVEDINPADDPNNQGEDEFEEAEQVREENLPDENEEQKQSNQKQENTEVEEHLVMAG 520 530 540 550 560 570 610 620 630 640 650 660 pF1KE1 NPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNAEETYGENDENTDDKNNDGEEQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 NPDQQEDNVDEQYQEEAEEEVQEDLTEEKKRELEHNAEETYGENDENTDDKNNDGEEQEV 580 590 600 610 620 630 670 680 690 pF1KE1 RDDNRPKGREEHYEEEEEEEEDGAAVAEKSHRRAEM :::::::::::::::::::::::::::::::::::: CCDS77 RDDNRPKGREEHYEEEEEEEEDGAAVAEKSHRRAEM 640 650 660 696 residues in 1 query sequences 18921897 residues in 33420 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Jun 21 11:07:55 2019 done: Fri Jun 21 11:07:55 2019 Total Scan time: 1.990 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]