FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4014, 192 aa 1>>>pF1KE4014 192 - 192 aa - 192 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9169+/-0.000402; mu= 15.6022+/- 0.025 mean_var=80.9140+/-17.246, 0's: 0 Z-trim(113.8): 268 B-trim: 596 in 1/54 Lambda= 0.142581 statistics sampled from 22995 (23348) to 22995 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.274), width: 16 Scan time: 5.270 The best scores are: opt bits E(85289) NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192) 1264 269.4 2.6e-72 NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175) 560 124.5 9.5e-29 XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 548 122.0 5.4e-28 NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 548 122.0 5.4e-28 NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 548 122.0 5.4e-28 NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 548 122.0 5.4e-28 NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 548 122.0 5.4e-28 NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 548 122.0 5.4e-28 NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180) 541 120.6 1.5e-27 NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180) 531 118.5 6.1e-27 NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192) 505 113.2 2.6e-25 NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201) 505 113.2 2.7e-25 XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196) 502 112.6 4e-25 NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196) 502 112.6 4e-25 XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398) 498 112.1 1.2e-24 NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574) 498 112.3 1.5e-24 XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201) 489 110.0 2.6e-24 NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201) 489 110.0 2.6e-24 NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200) 484 108.9 5.3e-24 NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 484 108.9 5.3e-24 NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200) 484 108.9 5.3e-24 NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200) 484 108.9 5.3e-24 NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184) 482 108.5 6.7e-24 NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179) 476 107.2 1.5e-23 XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569) 469 106.3 9.4e-23 NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569) 469 106.3 9.4e-23 NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181) 458 103.5 2e-22 XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182) 456 103.1 2.7e-22 NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182) 456 103.1 2.7e-22 NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179) 454 102.7 3.6e-22 NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546) 423 96.8 6.4e-20 XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137) 415 94.6 7.7e-20 XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212) 415 94.8 1e-19 XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142) 400 91.5 6.7e-19 NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142) 375 86.4 2.4e-17 NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142) 375 86.4 2.4e-17 NP_003215 (OMIM: 604699) ADP-ribosylation factor-r ( 201) 360 83.4 2.5e-16 XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 360 83.4 2.5e-16 XP_011526785 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 360 83.4 2.5e-16 NP_001254477 (OMIM: 604699) ADP-ribosylation facto ( 201) 360 83.4 2.5e-16 XP_011526784 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201) 360 83.4 2.5e-16 NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201) 360 83.4 2.5e-16 NP_001128230 (OMIM: 604699) ADP-ribosylation facto ( 173) 341 79.4 3.4e-15 NP_001254478 (OMIM: 604699) ADP-ribosylation facto ( 173) 341 79.4 3.4e-15 XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186) 337 78.7 6.4e-15 NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186) 337 78.7 6.4e-15 NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186) 337 78.7 6.4e-15 NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186) 337 78.7 6.4e-15 NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157) 335 78.2 7.6e-15 NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193) 336 78.5 7.6e-15 >>NP_079323 (OMIM: 614439) ADP-ribosylation factor-like (192 aa) initn: 1264 init1: 1264 opt: 1264 Z-score: 1419.2 bits: 269.4 E(85289): 2.6e-72 Smith-Waterman score: 1264; 99.5% identity (99.5% similar) in 192 aa overlap (1-192:1-192) 10 20 30 40 50 60 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNLSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVTVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: NP_079 TVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVPVVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVKSHMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVKSHMK 130 140 150 160 170 180 190 pF1KE4 SRGDTLAFFKQN :::::::::::: NP_079 SRGDTLAFFKQN 190 >>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho (175 aa) initn: 547 init1: 245 opt: 560 Z-score: 637.1 bits: 124.5 E(85289): 9.5e-29 Smith-Waterman score: 560; 44.1% identity (81.9% similar) in 177 aa overlap (1-177:1-175) 10 20 30 40 50 60 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELERNLSL ::.. :: .:. ..:.::::.:::.:.::::::....:::::.::::: . .:... NP_001 MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-KNVKF 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 TVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNVTVVL .:::::::.:.: .: : .:.::..::: .:..:..:.......:......... ... NP_001 NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 LANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVKSHMK .:::::.: :. ..: . . . .. :::::::: :: .:.:: .:. ::. :: NP_001 FANKQDLPDAMKPHEIQEKLGLTRI-RDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 120 130 140 150 160 170 190 pF1KE4 SRGDTLAFFKQN >>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 46.4% identity (84.9% similar) in 166 aa overlap (12-177:16-179) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... XP_005 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .: XP_005 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLK 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN . XP_005 NKK 180 >>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 46.4% identity (84.9% similar) in 166 aa overlap (12-177:16-179) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .: NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLANQLK 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN . NP_001 NKK 180 >>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 45.5% identity (85.0% similar) in 167 aa overlap (12-178:16-180) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .. NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLSNQLR 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN .. NP_001 NQK 180 >>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 45.5% identity (85.0% similar) in 167 aa overlap (12-178:16-180) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .. NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLSNQLR 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN .. NP_001 NQK 180 >>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 45.5% identity (85.0% similar) in 167 aa overlap (12-178:16-180) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .. NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLSNQLR 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN .. NP_001 NQK 180 >>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1 (181 aa) initn: 542 init1: 288 opt: 548 Z-score: 623.6 bits: 122.0 E(85289): 5.4e-28 Smith-Waterman score: 548; 45.5% identity (85.0% similar) in 167 aa overlap (12-178:16-180) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER :. ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :.:.::::::::.:.: .: : .::.::..::::.:..:..:..... ..: ....... NP_001 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::.:.:..: .:: . ...: ::::.: :: .:.:: .:. :.. .. NP_001 VLLVFANKQDLPNAMNAAEITDKLGLHSL-RHRNWYIQATCATSGDGLYEGLDWLSNQLR 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN .. NP_001 NQK 180 >>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho (180 aa) initn: 512 init1: 274 opt: 541 Z-score: 615.8 bits: 120.6 E(85289): 1.5e-27 Smith-Waterman score: 541; 45.9% identity (81.4% similar) in 172 aa overlap (1-172:5-174) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER ...: :. :: ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :. .::::::::.:.: .: : .::.::..::::.:..:..:: .....:........ NP_001 NICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK .....:::::::.:. . ..: . ...: : :.:::: :: : :: .:. :. NP_001 VLLVFANKQDMPNAMPVSELTDKLGLQHLRS-RTWYVQATCATQGTGLYDGLDWLSHELS 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN NP_001 KR 180 >>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho (180 aa) initn: 503 init1: 258 opt: 531 Z-score: 604.7 bits: 118.5 E(85289): 6.1e-27 Smith-Waterman score: 531; 44.8% identity (79.7% similar) in 172 aa overlap (1-172:5-174) 10 20 30 40 50 pF1KE4 MGSLGSKNPQTKQAQVLLLGLDSAGKSTLLYKLKLAKDITTIPTIGFNVEMIELER ..:: :. :: ..:..:::.:::.:.::::::.. .::::::::::: .: . NP_001 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-K 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NLSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV :. .::::::::...: .: : .::.::..::::.:..:..: .....: ...... NP_001 NICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 TVVLLANKQDMPGALTAEDITRMFKVKKLCSDRNWYVQPCCALTGEGLAQGFRKLTGFVK ...:.:::::.:.:.. ..: . ...: .:.:::: :: : :: .:. :. NP_001 VLLLFANKQDLPNAMAISEMTDKLGLQSL-RNRTWYVQATCATQGTGLYEGLDWLSNELS 120 130 140 150 160 170 180 190 pF1KE4 SHMKSRGDTLAFFKQN NP_001 KR 180 192 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:23:00 2016 done: Sun Nov 6 04:23:01 2016 Total Scan time: 5.270 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]