FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4077, 403 aa 1>>>pF1KE4077 403 - 403 aa - 403 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.1502+/-0.000482; mu= 9.3700+/- 0.030 mean_var=170.1574+/-36.027, 0's: 0 Z-trim(115.3): 209 B-trim: 725 in 1/54 Lambda= 0.098322 statistics sampled from 25386 (25636) to 25386 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.301), width: 16 Scan time: 7.360 The best scores are: opt bits E(85289) NP_775107 (OMIM: 616148) tripartite motif-containi ( 403) 2717 397.9 2.4e-110 NP_434698 (OMIM: 605661) E3 ubiquitin-protein liga ( 407) 724 115.2 3e-25 NP_998755 (OMIM: 605661) E3 ubiquitin-protein liga ( 407) 724 115.2 3e-25 NP_005789 (OMIM: 605661) E3 ubiquitin-protein liga ( 407) 724 115.2 3e-25 NP_001007279 (OMIM: 605661) E3 ubiquitin-protein l ( 410) 724 115.2 3e-25 NP_001128327 (OMIM: 606123) E3 ubiquitin-protein l ( 343) 290 53.5 9.1e-07 NP_001020111 (OMIM: 606123) E3 ubiquitin-protein l ( 477) 290 53.7 1.1e-06 XP_006711842 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 290 53.7 1.1e-06 NP_057186 (OMIM: 606123) E3 ubiquitin-protein liga ( 477) 290 53.7 1.1e-06 XP_011542512 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 290 53.7 1.1e-06 XP_011542511 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 477) 290 53.7 1.1e-06 XP_016856907 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 283 52.4 1.5e-06 XP_016856908 (OMIM: 606123) PREDICTED: E3 ubiquiti ( 262) 283 52.4 1.5e-06 XP_005249433 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 XP_005249432 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 NP_001229712 (OMIM: 600830) tripartite motif-conta ( 539) 285 53.0 2e-06 XP_006715243 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 XP_005249434 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 NP_003440 (OMIM: 600830) tripartite motif-containi ( 539) 285 53.0 2e-06 XP_005249431 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 XP_005249435 (OMIM: 600830) PREDICTED: tripartite ( 539) 285 53.0 2e-06 NP_060677 (OMIM: 616755) E3 ubiquitin-protein liga ( 475) 278 52.0 3.7e-06 XP_016857118 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 555) 277 51.9 4.6e-06 NP_006065 (OMIM: 606559) E3 ubiquitin-protein liga ( 498) 261 49.6 2e-05 NP_912730 (OMIM: 606474) tripartite motif-containi ( 358) 258 49.0 2.2e-05 XP_016884728 (OMIM: 300204,300928) PREDICTED: prob ( 685) 260 49.6 2.8e-05 NP_001180210 (OMIM: 189960,300000,300552) E3 ubiqu ( 228) 252 48.0 2.9e-05 NP_438112 (OMIM: 300204,300928) probable E3 ubiqui ( 705) 260 49.6 2.9e-05 XP_005262119 (OMIM: 300204,300928) PREDICTED: prob ( 715) 260 49.6 2.9e-05 NP_036348 (OMIM: 300204,300928) probable E3 ubiqui ( 735) 260 49.6 3e-05 NP_001180209 (OMIM: 189960,300000,300552) E3 ubiqu ( 451) 252 48.3 4.6e-05 NP_001180208 (OMIM: 189960,300000,300552) E3 ubiqu ( 489) 252 48.3 4.9e-05 XP_016885031 (OMIM: 189960,300000,300552) PREDICTE ( 489) 252 48.3 4.9e-05 NP_001180207 (OMIM: 189960,300000,300552) E3 ubiqu ( 540) 252 48.3 5.2e-05 XP_016885030 (OMIM: 189960,300000,300552) PREDICTE ( 540) 252 48.3 5.2e-05 XP_016885029 (OMIM: 189960,300000,300552) PREDICTE ( 552) 252 48.3 5.3e-05 NP_150631 (OMIM: 189960,300000,300552) E3 ubiquiti ( 629) 252 48.4 5.8e-05 XP_016885027 (OMIM: 189960,300000,300552) PREDICTE ( 629) 252 48.4 5.8e-05 XP_016885028 (OMIM: 189960,300000,300552) PREDICTE ( 629) 252 48.4 5.8e-05 XP_016885026 (OMIM: 189960,300000,300552) PREDICTE ( 629) 252 48.4 5.8e-05 XP_016885025 (OMIM: 189960,300000,300552) PREDICTE ( 667) 252 48.4 6.1e-05 NP_150632 (OMIM: 189960,300000,300552) E3 ubiquiti ( 667) 252 48.4 6.1e-05 NP_001180206 (OMIM: 189960,300000,300552) E3 ubiqu ( 667) 252 48.4 6.1e-05 NP_001092094 (OMIM: 189960,300000,300552) E3 ubiqu ( 667) 252 48.4 6.1e-05 NP_000372 (OMIM: 189960,300000,300552) E3 ubiquiti ( 667) 252 48.4 6.1e-05 XP_016885024 (OMIM: 189960,300000,300552) PREDICTE ( 680) 252 48.4 6.2e-05 XP_016885023 (OMIM: 189960,300000,300552) PREDICTE ( 718) 252 48.5 6.4e-05 XP_011543827 (OMIM: 189960,300000,300552) PREDICTE ( 718) 252 48.5 6.4e-05 XP_011543829 (OMIM: 189960,300000,300552) PREDICTE ( 718) 252 48.5 6.4e-05 XP_006724555 (OMIM: 189960,300000,300552) PREDICTE ( 718) 252 48.5 6.4e-05 >>NP_775107 (OMIM: 616148) tripartite motif-containing p (403 aa) initn: 2717 init1: 2717 opt: 2717 Z-score: 2102.2 bits: 397.9 E(85289): 2.4e-110 Smith-Waterman score: 2717; 100.0% identity (100.0% similar) in 403 aa overlap (1-403:1-403) 10 20 30 40 50 60 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 SITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 LTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 LTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 DKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 DKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALTI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 SLQEESPLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 SLQEESPLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIKNV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSEIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_775 LIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSEIT 310 320 330 340 350 360 370 380 390 400 pF1KE4 LIWFSEASLSVYQSLSNSLHKVKNILCHIFYLLKEFVWKIVSH ::::::::::::::::::::::::::::::::::::::::::: NP_775 LIWFSEASLSVYQSLSNSLHKVKNILCHIFYLLKEFVWKIVSH 370 380 390 400 >>NP_434698 (OMIM: 605661) E3 ubiquitin-protein ligase T (407 aa) initn: 640 init1: 244 opt: 724 Z-score: 574.3 bits: 115.2 E(85289): 3e-25 Smith-Waterman score: 724; 34.3% identity (70.6% similar) in 306 aa overlap (1-304:1-301) 10 20 30 40 50 60 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR :. .::.:::::: :.:.:::::::::.::..:::.::..: .::: :.:::.:: NP_434 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCR 10 20 30 40 50 70 80 90 100 110 pF1KE4 SITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLVCGH . : . :::.:: ::..:..:.:::.. . : . .: : ::::..:: : .:.:: NP_434 K--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 CLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQ : : :.: : . ....:: .:.:. ..:.... . : .. :. .: .: ... NP_434 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 GDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALT :.. : ..:..:. ::.:::. .:. . . . : : :.:.... : ..: . .. NP_434 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIK .... : :. ::..... :......:. ::: . . : .... .: .. .. NP_434 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLVDVD 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 NVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSE .. .:. NP_434 KLSLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFS 300 310 320 330 340 350 >>NP_998755 (OMIM: 605661) E3 ubiquitin-protein ligase T (407 aa) initn: 640 init1: 244 opt: 724 Z-score: 574.3 bits: 115.2 E(85289): 3e-25 Smith-Waterman score: 724; 34.3% identity (70.6% similar) in 306 aa overlap (1-304:1-301) 10 20 30 40 50 60 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR :. .::.:::::: :.:.:::::::::.::..:::.::..: .::: :.:::.:: NP_998 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCR 10 20 30 40 50 70 80 90 100 110 pF1KE4 SITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLVCGH . : . :::.:: ::..:..:.:::.. . : . .: : ::::..:: : .:.:: NP_998 K--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 CLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQ : : :.: : . ....:: .:.:. ..:.... . : .. :. .: .: ... NP_998 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 GDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALT :.. : ..:..:. ::.:::. .:. . . . : : :.:.... : ..: . .. NP_998 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIK .... : :. ::..... :......:. ::: . . : .... .: .. .. NP_998 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLVDVD 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 NVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSE .. .:. NP_998 KLSLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFS 300 310 320 330 340 350 >>NP_005789 (OMIM: 605661) E3 ubiquitin-protein ligase T (407 aa) initn: 640 init1: 244 opt: 724 Z-score: 574.3 bits: 115.2 E(85289): 3e-25 Smith-Waterman score: 724; 34.3% identity (70.6% similar) in 306 aa overlap (1-304:1-301) 10 20 30 40 50 60 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCPNCR :. .::.:::::: :.:.:::::::::.::..:::.::..: .::: :.:::.:: NP_005 MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCPTCR 10 20 30 40 50 70 80 90 100 110 pF1KE4 SITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLVCGH . : . :::.:: ::..:..:.:::.. . : . .: : ::::..:: : .:.:: NP_005 K--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 CLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEKMIQ : : :.: : . ....:: .:.:. ..:.... . : .. :. .: .: ... NP_005 CATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 GDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELMALT :.. : ..:..:. ::.:::. .:. . . . : : :.:.... : ..: . .. NP_005 KDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIGQIK .... : :. ::..... :......:. ::: . . : .... .: .. .. NP_005 EAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLVDVD 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 NVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITFLSE .. .:. NP_005 KLSLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFS 300 310 320 330 340 350 >>NP_001007279 (OMIM: 605661) E3 ubiquitin-protein ligas (410 aa) initn: 640 init1: 244 opt: 724 Z-score: 574.2 bits: 115.2 E(85289): 3e-25 Smith-Waterman score: 724; 34.3% identity (70.6% similar) in 306 aa overlap (1-304:4-304) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPLKCP :. .::.:::::: :.:.:::::::::.::..:::.::..: .::: :.::: NP_001 MDVMELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRP--APFKCP 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 NCRSITEIAPTGIESLPVNFALRAIIEKYQQ-EDHPDIVTCPEHYRQPLNVYCLLDKKLV .::. : . :::.:: ::..:..:.:::.. . : . .: : ::::..:: : .:. NP_001 TCRK--ETSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 CGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKLKEQKSHSEK :: : : :.: : . ....:: .:.:. ..:.... . : .. :. .: .: . NP_001 CGICATRGEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQ 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 MIQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERMKEIREQQLELM .. :.. : ..:..:. ::.:::. .:. . . . : : :.:.... : ..: . NP_001 LLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAF 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 ALTISLQEES-PLKFLEKVDDVRQHVQILKQRPLPEVQPVEIYPRVSKILKEEWSRTEIG .. .... : :. ::..... :......:. ::: . . : .... .: .. NP_001 NIAEAFKDVSEPIVFLQQMQEFREKIKVIKETPLPP-SNLPASPLMKNFDTSQWEDIKLV 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 QIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLISVILMSILFFNQHIITF .. .. .:. NP_001 DVDKLSLPQDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLS 300 310 320 330 340 350 >>NP_001128327 (OMIM: 606123) E3 ubiquitin-protein ligas (343 aa) initn: 180 init1: 158 opt: 290 Z-score: 242.5 bits: 53.5 E(85289): 9.1e-07 Smith-Waterman score: 298; 26.7% identity (53.4% similar) in 292 aa overlap (4-280:10-278) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL ..:: :: :: . : :: . :.:.::: :.. . . . : . . NP_001 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVT---CPEHYRQPLNVYCLL ::.:: :..: ..: : : . : :: :: . : ::. .::...: NP_001 PCPECR---EMSPQ--RNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHH-EPLKLFCQK 70 80 90 100 110 120 130 140 150 160 pF1KE4 DKKLVCGHCLTIGQHHGH---PIDD-LQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL :.. .: : .:. : : .. .:. :: .. . : ::.: : .: . NP_001 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTG--NL-----QA 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 KEQKSHSEKM--IQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERM .:..: .: . .. .: .. :...: : .... .: :: . : :. NP_001 REEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL-------ETEEEETASRL 170 180 190 200 210 230 240 250 260 270 pF1KE4 KE----IREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPL--PEVQPVEIYP .: . .: : : ..:.:.: :. ..:... .. .. . ::: : : NP_001 RESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAP-PTRP 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE4 RVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLIS : NP_001 RTVCRVPGQIEVLRGFLGKWAPRARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHW 280 290 300 310 320 330 >>NP_001020111 (OMIM: 606123) E3 ubiquitin-protein ligas (477 aa) initn: 158 init1: 158 opt: 290 Z-score: 240.7 bits: 53.7 E(85289): 1.1e-06 Smith-Waterman score: 298; 26.7% identity (53.4% similar) in 292 aa overlap (4-280:10-278) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL ..:: :: :: . : :: . :.:.::: :.. . . . : . . NP_001 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVT---CPEHYRQPLNVYCLL ::.:: :..: ..: : : . : :: :: . : ::. .::...: NP_001 PCPECR---EMSPQ--RNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHH-EPLKLFCQK 70 80 90 100 110 120 130 140 150 160 pF1KE4 DKKLVCGHCLTIGQHHGH---PIDD-LQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL :.. .: : .:. : : .. .:. :: .. . : ::.: : .: . NP_001 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTG--NL-----QA 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 KEQKSHSEKM--IQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERM .:..: .: . .. .: .. :...: : .... .: :: . : :. NP_001 REEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL-------ETEEEETASRL 170 180 190 200 210 230 240 250 260 270 pF1KE4 KE----IREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPL--PEVQPVEIYP .: . .: : : ..:.:.: :. ..:... .. .. . ::: : : NP_001 RESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAP-PTRP 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE4 RVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLIS : NP_001 RTVCRVPGQIEVLRGFLEDVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAY 280 290 300 310 320 330 >>XP_006711842 (OMIM: 606123) PREDICTED: E3 ubiquitin-pr (477 aa) initn: 158 init1: 158 opt: 290 Z-score: 240.7 bits: 53.7 E(85289): 1.1e-06 Smith-Waterman score: 298; 26.7% identity (53.4% similar) in 292 aa overlap (4-280:10-278) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL ..:: :: :: . : :: . :.:.::: :.. . . . : . . XP_006 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVT---CPEHYRQPLNVYCLL ::.:: :..: ..: : : . : :: :: . : ::. .::...: XP_006 PCPECR---EMSPQ--RNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHH-EPLKLFCQK 70 80 90 100 110 120 130 140 150 160 pF1KE4 DKKLVCGHCLTIGQHHGH---PIDD-LQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL :.. .: : .:. : : .. .:. :: .. . : ::.: : .: . XP_006 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTG--NL-----QA 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 KEQKSHSEKM--IQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERM .:..: .: . .. .: .. :...: : .... .: :: . : :. XP_006 REEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL-------ETEEEETASRL 170 180 190 200 210 230 240 250 260 270 pF1KE4 KE----IREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPL--PEVQPVEIYP .: . .: : : ..:.:.: :. ..:... .. .. . ::: : : XP_006 RESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAP-PTRP 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE4 RVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLIS : XP_006 RTVCRVPGQIEVLRGFLEDVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAY 280 290 300 310 320 330 >>NP_057186 (OMIM: 606123) E3 ubiquitin-protein ligase T (477 aa) initn: 158 init1: 158 opt: 290 Z-score: 240.7 bits: 53.7 E(85289): 1.1e-06 Smith-Waterman score: 298; 26.7% identity (53.4% similar) in 292 aa overlap (4-280:10-278) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL ..:: :: :: . : :: . :.:.::: :.. . . . : . . NP_057 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVT---CPEHYRQPLNVYCLL ::.:: :..: ..: : : . : :: :: . : ::. .::...: NP_057 PCPECR---EMSPQ--RNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHH-EPLKLFCQK 70 80 90 100 110 120 130 140 150 160 pF1KE4 DKKLVCGHCLTIGQHHGH---PIDD-LQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL :.. .: : .:. : : .. .:. :: .. . : ::.: : .: . NP_057 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTG--NL-----QA 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 KEQKSHSEKM--IQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERM .:..: .: . .. .: .. :...: : .... .: :: . : :. NP_057 REEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL-------ETEEEETASRL 170 180 190 200 210 230 240 250 260 270 pF1KE4 KE----IREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPL--PEVQPVEIYP .: . .: : : ..:.:.: :. ..:... .. .. . ::: : : NP_057 RESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAP-PTRP 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE4 RVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLIS : NP_057 RTVCRVPGQIEVLRGFLEDVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAY 280 290 300 310 320 330 >>XP_011542512 (OMIM: 606123) PREDICTED: E3 ubiquitin-pr (477 aa) initn: 158 init1: 158 opt: 290 Z-score: 240.7 bits: 53.7 E(85289): 1.1e-06 Smith-Waterman score: 298; 26.7% identity (53.4% similar) in 292 aa overlap (4-280:10-278) 10 20 30 40 50 pF1KE4 MHNFEEELTCPICYSIFEDPRVLPCSHTFCRNCLENILQASGNFYIWRPLRIPL ..:: :: :: . : :: . :.:.::: :.. . . . : . . XP_011 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDIVT---CPEHYRQPLNVYCLL ::.:: :..: ..: : : . : :: :: . : ::. .::...: XP_011 PCPECR---EMSPQ--RNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHH-EPLKLFCQK 70 80 90 100 110 120 130 140 150 160 pF1KE4 DKKLVCGHCLTIGQHHGH---PIDD-LQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL :.. .: : .:. : : .. .:. :: .. . : ::.: : .: . XP_011 DQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTG--NL-----QA 120 130 140 150 160 170 180 190 200 210 220 pF1KE4 KEQKSHSEKM--IQGDKEAVLQYFKELNDTLEQKKKSFLTALCDVGNLINQEYTPQIERM .:..: .: . .. .: .. :...: : .... .: :: . : :. XP_011 REEQSLAEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQAL-------ETEEEETASRL 170 180 190 200 210 230 240 250 260 270 pF1KE4 KE----IREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQRPL--PEVQPVEIYP .: . .: : : ..:.:.: :. ..:... .. .. . ::: : : XP_011 RESVACLDRQGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAP-PTRP 220 230 240 250 260 270 280 290 300 310 320 330 pF1KE4 RVSKILKEEWSRTEIGQIKNVLIPKMKISPKRMSCSWPGKDEKEVEFLKILNIVVVTLIS : XP_011 RTVCRVPGQIEVLRGFLEDVVPDATSAYPYLLLYESRQRRYLGSSPEGSGFCSKDRFVAY 280 290 300 310 320 330 403 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:12:29 2016 done: Sun Nov 6 04:12:30 2016 Total Scan time: 7.360 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]