FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6625, 334 aa 1>>>pF1KE6625 334 - 334 aa - 334 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8316+/-0.00102; mu= 2.9424+/- 0.061 mean_var=291.8560+/-58.944, 0's: 0 Z-trim(113.3): 133 B-trim: 0 in 0/52 Lambda= 0.075074 statistics sampled from 13827 (13960) to 13827 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.741), E-opt: 0.2 (0.429), width: 16 Scan time: 1.590 The best scores are: opt bits E(32554) CCDS3181.1 RSRC1 gene_id:51319|Hs108|chr3 ( 334) 2127 243.3 2.1e-64 CCDS63822.1 RSRC1 gene_id:51319|Hs108|chr3 ( 276) 1179 140.5 1.5e-33 >>CCDS3181.1 RSRC1 gene_id:51319|Hs108|chr3 (334 aa) initn: 2127 init1: 2127 opt: 2127 Z-score: 1269.9 bits: 243.3 E(32554): 2.1e-64 Smith-Waterman score: 2127; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE6 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL 250 260 270 280 290 300 310 320 330 pF1KE6 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA :::::::::::::::::::::::::::::::::: CCDS31 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA 310 320 330 >>CCDS63822.1 RSRC1 gene_id:51319|Hs108|chr3 (276 aa) initn: 1126 init1: 1126 opt: 1179 Z-score: 716.0 bits: 140.5 E(32554): 1.5e-33 Smith-Waterman score: 1619; 82.6% identity (82.6% similar) in 334 aa overlap (1-334:1-276) 10 20 30 40 50 60 pF1KE6 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS ::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRR------------- 70 80 90 100 130 140 150 160 170 180 pF1KE6 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA ::::::::::::::: CCDS63 ---------------------------------------------ESGNIKAGLEHLPPA 110 120 190 200 210 220 230 240 pF1KE6 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF 130 140 150 160 170 180 250 260 270 280 290 300 pF1KE6 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL 190 200 210 220 230 240 310 320 330 pF1KE6 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA :::::::::::::::::::::::::::::::::: CCDS63 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA 250 260 270 334 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:53:58 2016 done: Tue Nov 8 14:53:58 2016 Total Scan time: 1.590 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]