FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4047, 273 aa 1>>>pF1KE4047 273 - 273 aa - 273 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4813+/-0.000706; mu= 14.1016+/- 0.042 mean_var=68.2306+/-13.455, 0's: 0 Z-trim(109.7): 36 B-trim: 3 in 1/50 Lambda= 0.155269 statistics sampled from 11048 (11079) to 11048 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.34), width: 16 Scan time: 2.460 The best scores are: opt bits E(32554) CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 ( 273) 1871 427.6 4.5e-120 CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 ( 273) 1458 335.1 3.2e-92 CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 ( 263) 903 210.8 8.2e-55 CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 ( 286) 516 124.1 1.1e-28 >>CCDS3115.1 SPSB4 gene_id:92369|Hs108|chr3 (273 aa) initn: 1871 init1: 1871 opt: 1871 Z-score: 2269.2 bits: 427.6 E(32554): 4.5e-120 Smith-Waterman score: 1871; 100.0% identity (100.0% similar) in 273 aa overlap (1-273:1-273) 10 20 30 40 50 60 pF1KE4 MGQKLSGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 MGQKLSGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPED 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LDMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LDMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDL 190 200 210 220 230 240 250 260 270 pF1KE4 CRRSIRSALGRQRLQDISSLPLPQSLKNYLQYQ ::::::::::::::::::::::::::::::::: CCDS31 CRRSIRSALGRQRLQDISSLPLPQSLKNYLQYQ 250 260 270 >>CCDS102.1 SPSB1 gene_id:80176|Hs108|chr1 (273 aa) initn: 1458 init1: 1458 opt: 1458 Z-score: 1769.2 bits: 335.1 E(32554): 3.2e-92 Smith-Waterman score: 1458; 74.7% identity (90.5% similar) in 273 aa overlap (1-273:1-273) 10 20 30 40 50 60 pF1KE4 MGQKLSGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPED ::::..:..:.:..:.:. :: :.::.: . .:.::: ::::: .. ::: :.:: .: CCDS10 MGQKVTGGIKTVDMRDPTYRPLKQELQGLDYCKPTRLDLLLDMPPVSYDVQLLHSWNNND 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RSLNVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATA ::::::::.::.: :::::::::::.::::::..::::.:::.: :::::::::::::: CCDS10 RSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RAPLHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVV :::::::::.:::.. :::::::::.::::::::::. .::::: :::.: .:::.::. CCDS10 DAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LDMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDL ::::.:::::::::::.::::::::::::::::::::::::. :::.::::::::::::: CCDS10 LDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLDPEPLPLMDL 190 200 210 220 230 240 250 260 270 pF1KE4 CRRSIRSALGRQRLQDISSLPLPQSLKNYLQYQ ::::.: ::::.:: .: .:::: ::: :: :: CCDS10 CRRSVRLALGRERLGEIHTLPLPASLKAYLLYQ 250 260 270 >>CCDS8567.1 SPSB2 gene_id:84727|Hs108|chr12 (263 aa) initn: 519 init1: 431 opt: 903 Z-score: 1097.6 bits: 210.8 E(32554): 8.2e-55 Smith-Waterman score: 903; 56.6% identity (77.7% similar) in 242 aa overlap (34-273:26-263) 10 20 30 40 50 60 pF1KE4 KLSGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPEDRSL : :..::. : :..: ::.:::.: : CCDS85 MGQTALAGGSSSTPTPQALYPDLSCPEGLEELLSAPPPDLGAQRRHGWNPKDCSE 10 20 30 40 50 70 80 90 100 110 120 pF1KE4 NVFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATARAP :. ::. : :.:.:::::::: ::: :..::::::.:.:: .::::::::::::: :: CCDS85 NIEVKEGG-LYFERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAP 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE4 LHSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVA-YPAFLGPD-EAFALPDSLLVVL :.. :.::.::..::::::.::..:::..:. ::. ::: : . : . .:. ::::: CCDS85 LQTDHYAALLGSNSESWGWDIGRGKLYHQSKG-PGAPQYPA--GTQGEQLEVPERLLVVL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 DMDEGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDLC ::.::::.. . : ::: :::::::. :::.::::::.:.: .::.. :: :. : CCDS85 DMEEGTLGYAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCQVRIRYLGERRAEPHSLLHLS 180 190 200 210 220 230 250 260 270 pF1KE4 RRSIRSALGRQRLQDISSLPLPQSLKNYLQYQ : .: :: :: ..:.:::: ..: :: :: CCDS85 RLCVRHNLGDTRLGQVSALPLPPAMKRYLLYQ 240 250 260 >>CCDS46985.1 FBXO45 gene_id:200933|Hs108|chr3 (286 aa) initn: 472 init1: 164 opt: 516 Z-score: 628.5 bits: 124.1 E(32554): 1.1e-28 Smith-Waterman score: 516; 43.0% identity (71.0% similar) in 193 aa overlap (36-227:93-280) 10 20 30 40 50 60 pF1KE4 SGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQ-LRHAWNPEDRSLN : : : ..:. .. ..::.. .: : : CCDS46 CKHWYRCLHGDENSEVWRSLCARSLAEEALRTDILCNLPSYKAKIRAFQHAFSTNDCSRN 70 80 90 100 110 120 70 80 90 100 110 120 pF1KE4 VFVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATARAPL :..: . .:.::.:.:::::: : :.: ..: :::.. : . :: ::.:.:: :::. CCDS46 VYIKKNG-FTLHRNPIAQSTDGARTKIGFSEGRHAWEVWWEG-PLGTVAVIGIATKRAPM 130 140 150 160 170 180 130 140 150 160 170 180 pF1KE4 HSVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVVLDMD . ::.::.::: .::::.: . : :.:. . : ..: . . . . . . :.:::. CCDS46 QCQGYVALLGSDDQSWGWNLVDNNLLHNGEVN-G-SFPQCNNAPK-YQIGERIRVILDME 190 200 210 220 230 190 200 210 220 230 240 pF1KE4 EGTLSFIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLDPEPLPLMDLCRRS . ::.: ..:::::::: :::.::::.:. :::. :. CCDS46 DKTLAFERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLGKPLDG 240 250 260 270 280 250 260 270 pF1KE4 IRSALGRQRLQDISSLPLPQSLKNYLQYQ 273 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:16:42 2016 done: Sun Nov 6 04:16:43 2016 Total Scan time: 2.460 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]