FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9604, 376 aa 1>>>pF1KB9604 376 - 376 aa - 376 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 12.6292+/-0.000406; mu= -13.8196+/- 0.025 mean_var=585.6851+/-121.983, 0's: 0 Z-trim(126.3): 92 B-trim: 919 in 1/61 Lambda= 0.052996 statistics sampled from 51685 (51825) to 51685 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.834), E-opt: 0.2 (0.608), width: 16 Scan time: 10.700 The best scores are: opt bits E(85289) NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376) 2703 220.7 4.5e-57 NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465) 742 70.8 7.1e-12 NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373) 629 62.1 2.5e-09 NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495) 617 61.3 5.6e-09 NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345) 607 60.4 7.5e-09 NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319) 567 57.3 5.9e-08 NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478) 564 57.2 9.1e-08 NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330) 556 56.4 1.1e-07 NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501) 550 56.2 2e-07 NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553) 548 56.1 2.3e-07 NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408) 530 54.6 5e-07 NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 519 53.8 9.4e-07 XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte ( 439) 514 53.4 1.2e-06 NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472) 514 53.4 1.3e-06 NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 511 53.1 1.4e-06 NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417) 509 53.0 1.5e-06 NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416) 505 52.7 1.9e-06 NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489) 505 52.7 2.1e-06 NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 489 51.4 4.1e-06 NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439) 483 51.0 6.3e-06 NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379) 480 50.7 6.7e-06 NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403) 466 49.7 1.5e-05 NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457) 444 48.0 5.1e-05 NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463) 444 48.0 5.1e-05 NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350) 400 44.5 0.00044 NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660) 388 43.9 0.0013 XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570) 364 42.0 0.0041 NP_001032242 (OMIM: 616302) forkhead box protein K ( 733) 364 42.1 0.0048 NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421) 356 41.3 0.0051 NP_658982 (OMIM: 274600,600791,601093) forkhead bo ( 283) 342 40.0 0.0082 >>NP_075555 (OMIM: 110100,605597,608996) forkhead box pr (376 aa) initn: 2703 init1: 2703 opt: 2703 Z-score: 1145.6 bits: 220.7 E(85289): 4.5e-57 Smith-Waterman score: 2703; 100.0% identity (100.0% similar) in 376 aa overlap (1-376:1-376) 10 20 30 40 50 60 pF1KB9 MMASYPEPEDAAGALLAPETGRTVKEPEGPPPSPGKGGGGGGGTAPEKPDPAQKPPYSYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 MMASYPEPEDAAGALLAPETGRTVKEPEGPPPSPGKGGGGGGGTAPEKPDPAQKPPYSYV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 ALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 ALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 GERKGNYWTLDPACEDMFEKGNYRRRRRMKRPFRPPPAHFQPGKGLFGAGGAAGGCGVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 GERKGNYWTLDPACEDMFEKGNYRRRRRMKRPFRPPPAHFQPGKGLFGAGGAAGGCGVAG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 AGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 AGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 AAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 AAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 AAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_075 AAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSY 310 320 330 340 350 360 370 pF1KB9 WDHDSKTGALHSRLDL :::::::::::::::: NP_075 WDHDSKTGALHSRLDL 370 >>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo (465 aa) initn: 506 init1: 506 opt: 742 Z-score: 334.1 bits: 70.8 E(85289): 7.1e-12 Smith-Waterman score: 751; 42.4% identity (56.7% similar) in 363 aa overlap (7-355:70-422) 10 20 30 pF1KB9 MMASYPEPEDAAGALLAPETGRTVKEPEGPPPSPGK : :: :::: .: . : :: :. : NP_004 GGGGPRLAVPAQRRRRRRSYAGEDELEDLEEEEDDDDILLAPPAGGS-PAPPGPAPAAGA 40 50 60 70 80 90 40 50 60 70 80 pF1KB9 G--GGGGGGTA-------PEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAK : :::::: : .: ::::::.:::.::: .: .:::::: : ..: .. NP_004 GAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGR 100 110 120 130 140 150 90 100 110 120 130 140 pF1KB9 FPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRR ::.:... .::::::::::::.::.:.::: :. ::::::::: :::..:.. ::: NP_004 FPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRR 160 170 180 190 200 210 150 160 170 180 190 200 pF1KB9 RRMKR-PFRPPPAHFQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGF--LNNS .:.:: :. :: : . : ::: :::: : .:.: . :: :. . . NP_004 KRFKRQPLLPPNAAAAESLLLRGAG-AAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCG 220 230 240 250 260 270 210 220 230 240 250 260 pF1KB9 WPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQS . : :: : : ::::::::: . : : ... :: : .: :. . NP_004 YGLQLPPYAPPSALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHP--LG 280 290 300 310 320 330 270 280 290 300 310 320 pF1KB9 MALPPGVVNSYNGLGGPPA-APPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQL ::: . : ::: : : : . : ::: : : : .: NP_004 AALPGPLPASAAKAGGPGASALARSPFSIESIIGGSLGPAAAAAAA-----AQAAAAAQA 340 350 360 370 380 390 330 340 350 360 370 pF1KB9 SPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKTGALHSRLDL ::. .::::::. .:. : : : :. NP_004 SPSPSPVAAPPAPG-SSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQG 400 410 420 430 440 NP_004 TALSSVENFTARISNC 450 460 >>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr (373 aa) initn: 678 init1: 496 opt: 629 Z-score: 288.6 bits: 62.1 E(85289): 2.5e-09 Smith-Waterman score: 629; 36.9% identity (60.3% similar) in 320 aa overlap (18-324:12-330) 10 20 30 40 50 pF1KB9 MMASYPEPEDAAGALLAPETGRTVKEPEGPPPS----PGKGGG-GGGGTAPEKPDPAQKP ::. :::: .: . ::.. : :.:: ..: :: NP_004 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKP 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 PYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKV ::::.::::::: .. :.::::.:::..: .::::. : : :::::::::.::.::.:. NP_004 PYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB9 PREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRP-FRPPPAHFQPGKGLFGAGGAA :::.: :::::.::: :::::.:.. :::.:.:: . ::... . . .:..:: NP_004 PREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAA 120 130 140 150 160 170 180 190 200 210 220 pF1KB9 GGCGVAGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYAS---CQM-AAAAAAAAA .. .. :: . : . .:. : : :: .: :: :.. . . . NP_004 AAAAAIFPGAVPAARPPYPGAVYAGYAPPSLAAP-PPVYYPAASPGPCRVFGLVPERPLS 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB9 AAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPH . .:..::.. . . ..::.. : . : : . . .:: .: : NP_004 PELGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGPDGAYPQGAG 240 250 260 270 280 290 290 300 310 320 330 340 pF1KB9 PHPHPHAHHLHAAAAPPPAPPHHGAAAPPP--GQLSPASPATAAPPAPAPTSAPGLQFAC : .: . :.:: . :. . :. :: NP_004 SAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGA 300 310 320 330 340 350 350 360 370 pF1KB9 ARQPELAMMHCSYWDHDSKTGALHSRLDL NP_004 YHARHAAAYPGGIDRFVSAM 360 370 >>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo (495 aa) initn: 870 init1: 450 opt: 617 Z-score: 282.2 bits: 61.3 E(85289): 5.6e-09 Smith-Waterman score: 661; 39.5% identity (57.0% similar) in 372 aa overlap (11-351:90-445) 10 20 30 pF1KB9 MMASYPEPEDAAGALLAPETGRTV-KEPEGPPPSPGKGGG ::.: .: : .. . :: :.: .::. NP_004 AEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGA 60 70 80 90 100 110 40 50 60 70 80 90 pF1KB9 GGGGTAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQ . .: ::::::.:::.::: .: .:::::: : ..: ..::.:... .:: NP_004 A-------TRSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQ 120 130 140 150 160 170 100 110 120 130 140 150 pF1KB9 NSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKR-PFRPPP ::::::::::.::.:.::: :. ::::::::: :::..:.. :::.:.:: :. :: NP_004 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPH 180 190 200 210 220 230 160 170 180 190 200 pF1KB9 AHFQPGKGLFGAGGAAGGC-------GVAGAGADGYGY-LAPPKYLQSGFLNNSWPLPQP : .: :. ::::.. : :. :: :::: :: : : . : : : NP_004 PHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAY------GAPPPGPAP 240 250 260 270 280 210 220 230 240 250 260 pF1KB9 -PSPMPYASCQMAAAAAAAAAAA-----AAAGPGSPGAAAVVKGLAGPAASYGPYTRVQS : : :.: :::::: . ::: : .: .:.: : :: : . .: . NP_004 HPHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAG-AGSAPAPAPASGSGP 290 300 310 320 330 340 270 280 290 300 310 pF1KB9 MALPPGVVNSYNG--LGGPPA------APPPPPHPHPHPHA---HHLHAAAAPPPAPPHH : :. .. : :: : .:: : : . :.. :. . NP_004 GPGPAGL-PAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGA 350 360 370 380 390 400 320 330 340 350 360 pF1KB9 GAAAPPP---GQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKTGA ::. : .. . . ::::. : ..:: :: : : NP_004 GAGQRPSFSIDHIMGHGGGGAAPPG-AGEGSPGPPFAAAAGPGGQAQVLAMLTAPALAPV 410 420 430 440 450 460 370 pF1KB9 LHSRLDL NP_004 AGHIRLSHPGDALLSSGSRFASKVAGLSGCHF 470 480 490 >>NP_005241 (OMIM: 603252) forkhead box protein L1 [Homo (345 aa) initn: 681 init1: 557 opt: 607 Z-score: 279.9 bits: 60.4 E(85289): 7.5e-09 Smith-Waterman score: 612; 38.8% identity (58.7% similar) in 312 aa overlap (29-319:22-316) 10 20 30 40 50 pF1KB9 MMASYPEPEDAAGALLAPETGRTVKEPEGP--PPSPGKGGGGGGGTAPEKPDPAQKPPYS :: : : . ... .: . . :::::: NP_005 MSHLFDPRLPALAASPMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYS 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 YVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPRE :.:::::::... :.:.::.::::.:. .::::. :..:::::::::::::.::.::::: NP_005 YIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPRE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB9 GGGERKGNYWTLDPACEDMFEKGNYRRRRRMKRPF-------RP-PPAHFQPGKGLFGAG : ::.:::::: : ::::.::::::.: .: :: .: . ... :: NP_005 KGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETHQRSAEAQPEAG 120 130 140 150 160 170 180 190 200 210 220 pF1KB9 GAAGGCGVA----GAGADGYGYL----APPKYLQSGFLNNSWPLPQPPSPMPYASCQMAA ..::: : : :. : . : .:: :. :: :. . : :: NP_005 SGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLH-------WPGTASPNEDAGDAAQGAA 180 190 200 210 220 230 240 250 260 270 280 pF1KB9 AAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPA :.:.. :: .. ::::: ::. .: . .: .. . . . ::. NP_005 AVAVGQAARTGDGPGSP---------LRPASRSSPKSSDKSKSFSIDSILAGKQGQKPPS 230 240 250 260 270 290 300 310 320 330 pF1KB9 APPPPPHPHPHPHAHHLHA---AAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTS . .: : .. : : ::. :: ... : NP_005 GDELLGGAKPGPGGR-LGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPLQ 280 290 300 310 320 330 340 350 360 370 pF1KB9 APGLQFACARQPELAMMHCSYWDHDSKTGALHSRLDL NP_005 VPDTVLHFQ 340 >>NP_036318 (OMIM: 107250,601094,610256) forkhead box pr (319 aa) initn: 520 init1: 432 opt: 567 Z-score: 263.8 bits: 57.3 E(85289): 5.9e-08 Smith-Waterman score: 572; 39.2% identity (55.6% similar) in 293 aa overlap (4-269:25-310) 10 20 30 pF1KB9 MMASYPEPEDAAGALLA--PETGRTVKEPEGPPPSPGKG : : : ::: . :: . . . .: :.:: : NP_036 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPG 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB9 GGGGGGTAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKG ..: ::::::.::::::. .. .::::..::..: .: ::. . . NP_036 ------RRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRK 70 80 90 100 110 100 110 120 130 140 150 pF1KB9 WQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRPFRPP :::::::::.::.::.::::: :. :::::::::: :::..:.. :::.:.:: : NP_036 WQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFKRAELPA 120 130 140 150 160 170 160 170 180 190 200 pF1KB9 PAHFQPGKGL-FGAGGAAGGCGVA---GAGADGYGYLAPPKYLQSGFLNNSWP------L : :: : : . : . : : . : : : . .. : : : NP_036 HAAAAPGPPLPFPYAPYAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGA 180 190 200 210 220 230 210 220 230 240 250 pF1KB9 PQPPS-PMPYASCQMAAAAAAAAAA-------------AAAAGPGSPGAAAVVKGLAGPA :.:: : :. ::::. :. ::: : : . .::::: NP_036 PEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPG-PLPAEPLLALAGPA 240 250 260 270 280 290 260 270 280 290 300 310 pF1KB9 ASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLHAAAAPPPAPPHH :. :: . ... :: NP_036 AALGPLSPGEAYLRQPGFASGLERYL 300 310 >>NP_036315 (OMIM: 607836,611539) forkhead box protein D (478 aa) initn: 561 init1: 465 opt: 564 Z-score: 260.4 bits: 57.2 E(85289): 9.1e-08 Smith-Waterman score: 626; 36.2% identity (57.3% similar) in 398 aa overlap (8-361:82-475) 10 20 pF1KB9 MMASYPEPEDAAGA-------LLAPET-----GRTVK :..:::: . :::. : . NP_036 ELRLDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGE 60 70 80 90 100 110 30 40 50 60 70 80 pF1KB9 EPEGPPPSPGKGGGGGGGTAPEKPDPAQ-KPPYSYVALIAMAIRESAEKRLTLSGIYQYI : . .:: :.:..:: :: :: . ::::::.:::.::: .: .:.:::::: ..: NP_036 EGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFI 120 130 140 150 160 170 90 100 110 120 130 140 pF1KB9 IAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY- .::.:... .::::::::::::.::.:.::: :. ::::::::: ::::..:.. NP_036 SNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFL 180 190 200 210 220 230 150 160 170 180 190 pF1KB9 RRRRRMKRP----FRPPPAHFQPGKGLFGAGGAAGGCGVAG--------AGADGYGY-LA :::.:.:: .: : .. . : .. ..:::. : : :.: .:.. : NP_036 RRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAA 240 250 260 270 280 290 200 210 220 230 240 pF1KB9 PPKYLQSGFLNNSWPLPQPPSP-MPYASCQMAAAAAAAAAAAAAA--GPG------SPGA .. :. . :: : .: .: : . .. . ::: .. ::: : :: NP_036 AAAAAAAAALQYPYALP-PVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGA 300 310 320 330 340 350 250 260 270 280 290 300 pF1KB9 AAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPHPHPHAHHLHA ::.. : :: :.. . . . : : .. : .:: :::: . . NP_036 AAAAAGTAGAAGTTASLIKSEPSARPSFSIE--NIIGGGPAAPGGSAVGAGVAGGTGGSG 360 370 380 390 400 310 320 330 340 350 pF1KB9 AAAP------PPAPPHHGA--AAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPEL ... ::. . .: :. : .:: . :: :: .: :. :: : . NP_036 GGSTAQSFLRPPGTVQSAALMATHQPLSLS-RTTATIAPILSVPLSGQFLQPAASAAAAA 410 420 430 440 450 460 360 370 pF1KB9 AMMHCSYWDHDSKTGALHSRLDL : . : NP_036 AAAAQAKWPAQ 470 >>NP_004109 (OMIM: 602939) forkhead box protein S1 [Homo (330 aa) initn: 556 init1: 471 opt: 556 Z-score: 259.1 bits: 56.4 E(85289): 1.1e-07 Smith-Waterman score: 560; 36.2% identity (55.3% similar) in 340 aa overlap (32-360:5-321) 10 20 30 40 50 60 pF1KB9 MASYPEPEDAAGALLAPETGRTVKEPEGPPPSPGKGGGGGGGTAPEKPDPAQKPPYSYVA : :: : :: .:. ::::::.: NP_004 MQQQPLPGPG-------APTT-EPT-KPPYSYIA 10 20 70 80 90 100 110 120 pF1KB9 LIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGG ::::::. : .: ::::::.::...: ::..:. ::::::::::::::::.::::. NP_004 LIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFVKVPRDDRK 30 40 50 60 70 80 130 140 150 160 170 pF1KB9 ERKGNYWTLDPACEDMFEKGNY-RRRRRMKRPFRPPPAHFQPGKGLFGAGGAAG-GCGVA ::.:::::: :.::::.:.. :::::. : .. :.:. : :.. :: NP_004 PGKGSYWTLDPDCHDMFEHGSFLRRRRRFTRQTGAEGTR-GPAKARRGPLRATSQDPGVP 90 100 110 120 130 140 180 190 200 210 220 230 pF1KB9 GAGADGYGYLAP----PKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAAAAAAG .: . . : :: :. : : .. : . : :. . .. NP_004 NATTGRQCSFPPELPDPKGLSFGGLVGAMPASMCP-----ATTDGRPRPPMEPKEISTPK 150 160 170 180 190 240 250 260 270 280 290 pF1KB9 PGSPGAAAVVKGLAG-PAASY-GPYTRVQSMA-LPPGVVNSYNGLGGPPAAPPPPPH--P :. :: :. . .. :: .. . .....:. : :.. .:.:. . NP_004 PACPGELPVATSSSSCPAFGFPAGFSEAESFNKAPTPVLSPESGIGSSYQCRLQALNFCM 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB9 HPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQ : .:: :.::: :::: :::.: .: : : :. . NP_004 GADPGLEHLLASAAPSPAPP------TPPGSLR--APLPLPTDHKEPWVAGGFPVQGGSG 260 270 280 290 300 310 360 370 pF1KB9 PELAMMHCSYWDHDSKTGALHSRLDL :.. : : NP_004 YPLGLTPCLYRTPGMFFFE 320 330 >>NP_005242 (OMIM: 153400,602402) forkhead box protein C (501 aa) initn: 655 init1: 482 opt: 550 Z-score: 254.4 bits: 56.2 E(85289): 2e-07 Smith-Waterman score: 560; 33.8% identity (54.7% similar) in 373 aa overlap (11-363:27-392) 10 20 30 40 pF1KB9 MMASYPEPEDAAGAL--LAPETGRTVKEPEGPPPSPGKGGGGGG :::. .: : .:: . :.. . NP_005 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYH 10 20 30 40 50 60 50 60 70 80 90 100 pF1KB9 GTAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSI : : ::::::.:::.:::... ::..::.::::.:. .::::..::.:::::: NP_005 HHQPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSI 70 80 90 100 110 120 110 120 130 140 150 160 pF1KB9 RHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRPFRPPPAHFQ ::::::::::.::::. ::.:::::: .:::.:.. :::::.:. . . . NP_005 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKK--KDVSKEKE 130 140 150 160 170 170 180 190 200 210 220 pF1KB9 PGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMA : ::. :: : . :: . .. ... : : . . NP_005 ERAHLKEPPPAAS----KGAPATPHLADAPKEAEKKVVIKSEAASPALPVITKVETLSPE 180 190 200 210 220 230 230 240 250 260 270 pF1KB9 AAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMAL---PPG-VVNSYNGL .: .. .::.. ::: .. . :.: . : .. . :.: ::: .. : NP_005 SALQGSPRSAASTPAGSPDGSLPEHHAAAPNGLPG-FSVENIMTLRTSPPGGELSPGAGR 240 250 260 270 280 290 280 290 300 310 320 pF1KB9 GG---PPAAPP---PPPHPHPHPHAHHLHAAAAPP------PAPPHHGAAAPPPGQLSPA .: :: : : :: . .: :. :.:.:: . :: : . :: NP_005 AGLVVPPLALPYAAAPPAAYGQPCAQGLEAGAAGGYQCSMRAMSLYTGAERPAHMCVPPA 300 310 320 330 340 350 330 340 350 360 370 pF1KB9 SPATAAPPAPAPTSA-PGLQFACARQPELAMMHCSYWDHDSKTGALHSRLDL . . .::: .:..: ... :: . : NP_005 LDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPPPPPAPQPQPTPQ 360 370 380 390 400 410 NP_005 PGAAAAQAASWYLNHSGDLNHLPGHTFAAQQQTFPNVREMFNSHRLGIENSTLGESQVSG 420 430 440 450 460 470 >>NP_001444 (OMIM: 601090,601631,602482) forkhead box pr (553 aa) initn: 652 init1: 463 opt: 548 Z-score: 253.1 bits: 56.1 E(85289): 2.3e-07 Smith-Waterman score: 611; 36.6% identity (55.0% similar) in 358 aa overlap (11-342:33-356) 10 20 30 pF1KB9 MMASYPEPEDAAGALLA-PETGRTVKEPEGPPPSPGKGGG :.:. : : . ..: :: . NP_001 ARYSVSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMAR 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB9 GGGGTAPE-KPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGW . : .:. .: ::::::.:::.:::... .:..::.::::.:. .::::. ::.:: NP_001 AYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGW 70 80 90 100 110 120 100 110 120 130 140 150 pF1KB9 QNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKRP----- ::::::::::::::.::::. ::.:::::: .:::.:.. :::::.:. NP_001 QNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKD 130 140 150 160 170 180 160 170 180 190 200 pF1KB9 ---------FRPPPAHFQPGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFLNNS .::: :: . : ... : :: .:. .:. NP_001 KEEKDRLHLKEPPPPGRQPPPA-----------PPEQADGNAPGPQPPPVRIQDIKTENG 190 200 210 220 230 210 220 230 240 250 260 pF1KB9 WPLPQPPSPMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVVKGLAGPAASYGPYTRVQS :.::.:. . ::: : :: :::: : . .: .: . ..: NP_001 -TCPSPPQPL---------------SPAAALGSGS--AAAVPK-IESPDSSS---SSLSS 240 250 260 270 280 290 300 310 pF1KB9 MALPPGVVNSYN--GLGGPPAAPPPP----PHPHPHPHAHHLHAAAAPPPAPPHHGAAAP . ::: . : .: : .::::: : :: : .. . . . :. .:: NP_001 GSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPH-HSQGFSVDNIMTSLRGSPQSAAAEL 270 280 290 300 310 320 320 330 340 350 360 370 pF1KB9 PPGQLSPA---SPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKTGALHSRL : :. : : : ::: . .:: NP_001 SSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAG 330 340 350 360 370 380 376 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 02:05:10 2016 done: Tue Nov 8 02:05:11 2016 Total Scan time: 10.700 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]