FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5552, 417 aa 1>>>pF1KE5552 417 - 417 aa - 417 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.5450+/-0.00095; mu= -1.8554+/- 0.057 mean_var=227.8598+/-46.083, 0's: 0 Z-trim(112.7): 20 B-trim: 0 in 0/51 Lambda= 0.084965 statistics sampled from 13452 (13458) to 13452 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.413), width: 16 Scan time: 3.310 The best scores are: opt bits E(32554) CCDS2917.1 PPP4R2 gene_id:151987|Hs108|chr3 ( 417) 2732 347.6 1.3e-95 >>CCDS2917.1 PPP4R2 gene_id:151987|Hs108|chr3 (417 aa) initn: 2732 init1: 2732 opt: 2732 Z-score: 1829.8 bits: 347.6 E(32554): 1.3e-95 Smith-Waterman score: 2732; 100.0% identity (100.0% similar) in 417 aa overlap (1-417:1-417) 10 20 30 40 50 60 pF1KE5 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 MDVERLQEALKDFEKRGKKEVCPVLDQFLCHVAKTGETMIQWSQFKGYFIFKLEKVMDDF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 RTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLTDPRRNYTGTDK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 FLRGVEKNVMVVSCVYPSSEKNNSNSLNRMNGVMFPGNSPSYTERSNINGPGTPRPLNRP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 KVSLSAPMTTNGLPESTDSKEANLQQNEEKNHSDSSTSESEVSSVSPLKNKHPDEDAVEA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 EGHEVKRLRFDKEGEVRETASQTTSSEISSVMVGETEASSSSQDKDKDSRCTRQHCTEED 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 EEEDEEEEEESFMTSREMIPERKNQEKESDDALTVNEETSEENNQMEESDVSQAEKDLLH 310 320 330 340 350 360 370 380 390 400 410 pF1KE5 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 SEGSENEGPVSSSSSDCRETEELVGSNSSKTGEILSESSMENDDEATEVTDEPMEQD 370 380 390 400 410 417 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:45:22 2016 done: Tue Nov 8 01:45:23 2016 Total Scan time: 3.310 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]