FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1653, 170 aa 1>>>pF1KE1653 170 - 170 aa - 170 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1899+/-0.000632; mu= 13.9377+/- 0.038 mean_var=66.5855+/-13.107, 0's: 0 Z-trim(111.4): 5 B-trim: 0 in 0/52 Lambda= 0.157175 statistics sampled from 12339 (12340) to 12339 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.379), width: 16 Scan time: 1.820 The best scores are: opt bits E(32554) CCDS2762.2 CAMP gene_id:820|Hs108|chr3 ( 173) 1133 264.8 1.9e-71 >>CCDS2762.2 CAMP gene_id:820|Hs108|chr3 (173 aa) initn: 1133 init1: 1133 opt: 1133 Z-score: 1396.2 bits: 264.8 E(32554): 1.9e-71 Smith-Waterman score: 1133; 100.0% identity (100.0% similar) in 170 aa overlap (1-170:4-173) 10 20 30 40 50 pF1KE1 MKTQRDGHSLGRWSLVLLLLGLVMPLAIIAQVLSYKEAVLRAIDGINQRSSDANLYR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 MGTMKTQRDGHSLGRWSLVLLLLGLVMPLAIIAQVLSYKEAVLRAIDGINQRSSDANLYR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 LLDLDPRPTMDGDPDTPKPVSFTVKETVCPRTTQQSPEDCDFKKDGLVKRCMGTVTLNQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 LLDLDPRPTMDGDPDTPKPVSFTVKETVCPRTTQQSPEDCDFKKDGLVKRCMGTVTLNQA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 RGSFDISCDKDNKRFALLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTES ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS27 RGSFDISCDKDNKRFALLGDFFRKSKEKIGKEFKRIVQRIKDFLRNLVPRTES 130 140 150 160 170 170 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:49:22 2016 done: Sun Nov 6 17:49:22 2016 Total Scan time: 1.820 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]