FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3230, 536 aa 1>>>pF1KE3230 536 - 536 aa - 536 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4337+/-0.000886; mu= 18.0502+/- 0.053 mean_var=68.3826+/-13.504, 0's: 0 Z-trim(105.9): 15 B-trim: 0 in 0/50 Lambda= 0.155096 statistics sampled from 8675 (8678) to 8675 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.267), width: 16 Scan time: 3.160 The best scores are: opt bits E(32554) CCDS2678.1 XYLB gene_id:9942|Hs108|chr3 ( 536) 3611 817.2 0 >>CCDS2678.1 XYLB gene_id:9942|Hs108|chr3 (536 aa) initn: 3611 init1: 3611 opt: 3611 Z-score: 4363.9 bits: 817.2 E(32554): 0 Smith-Waterman score: 3611; 100.0% identity (100.0% similar) in 536 aa overlap (1-536:1-536) 10 20 30 40 50 60 pF1KE3 MAEHAPRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 MAEHAPRRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 VTSPVLMWVQALDIILEKMKASGFDFSQVLALSGAGQQHGSIYWKAGAQQALTSLSPDLR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 LHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 QQNPEAYSHTERISLVSSFAASLFLGSYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPH 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 LEEKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMRLEEGDIAVSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 LEEKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMRLEEGDIAVSLG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 TSDTLFLWLQEPMPALEGHIFCNPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 TSDTLFLWLQEPMPALEGHIFCNPVDSQHYMALLCFKNGSLMREKIRNESVSRSWSDFSK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 ALQSTEMGNGGNLGFYFDVMEITPEIIGRHRFNTENHKVAAFPGDVEVRALIEGQFMAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 ALQSTEMGNGGNLGFYFDVMEITPEIIGRHRFNTENHKVAAFPGDVEVRALIEGQFMAKR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 IHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 IHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHG 430 440 450 460 470 480 490 500 510 520 530 pF1KE3 LAGGTDVPFSEVVKLAPNPRLAATPSPGASQVYEALLPQYAKLEQRILSQTRGPPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 LAGGTDVPFSEVVKLAPNPRLAATPSPGASQVYEALLPQYAKLEQRILSQTRGPPE 490 500 510 520 530 536 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:39:32 2016 done: Sun Nov 6 01:39:33 2016 Total Scan time: 3.160 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]