FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6602, 238 aa 1>>>pF1KE6602 238 - 238 aa - 238 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8156+/-0.000292; mu= 17.1661+/- 0.018 mean_var=58.9631+/-11.475, 0's: 0 Z-trim(117.1): 21 B-trim: 0 in 0/54 Lambda= 0.167026 statistics sampled from 28746 (28767) to 28746 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.337), width: 16 Scan time: 4.370 The best scores are: opt bits E(85289) NP_001186481 (OMIM: 612120,615238) cell death acti ( 238) 1574 387.0 1.5e-107 NP_001308071 (OMIM: 612120,615238) cell death acti ( 238) 1574 387.0 1.5e-107 NP_071377 (OMIM: 612120,615238) cell death activat ( 238) 1574 387.0 1.5e-107 NP_001186552 (OMIM: 612120,615238) cell death acti ( 251) 1574 387.0 1.6e-107 NP_001186480 (OMIM: 612120,615238) cell death acti ( 248) 1142 282.9 3.5e-76 NP_001308073 (OMIM: 612120,615238) cell death acti ( 164) 1111 275.3 4.4e-74 NP_001308072 (OMIM: 612120,615238) cell death acti ( 164) 1111 275.3 4.4e-74 NP_001270 (OMIM: 604440) cell death activator CIDE ( 219) 597 151.5 1.1e-36 NP_001305312 (OMIM: 604440) cell death activator C ( 253) 597 151.6 1.2e-36 NP_001305736 (OMIM: 604441) cell death activator C ( 219) 545 139.0 6.3e-33 XP_011534961 (OMIM: 604441) PREDICTED: cell death ( 219) 545 139.0 6.3e-33 NP_055245 (OMIM: 604441) cell death activator CIDE ( 219) 545 139.0 6.3e-33 XP_016876710 (OMIM: 604441) PREDICTED: cell death ( 219) 545 139.0 6.3e-33 NP_998731 (OMIM: 601882) DNA fragmentation factor ( 268) 162 46.8 4.5e-05 NP_004392 (OMIM: 601882) DNA fragmentation factor ( 331) 162 46.8 5.4e-05 >>NP_001186481 (OMIM: 612120,615238) cell death activato (238 aa) initn: 1574 init1: 1574 opt: 1574 Z-score: 2051.6 bits: 387.0 E(85289): 1.5e-107 Smith-Waterman score: 1574; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238) 10 20 30 40 50 60 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ 190 200 210 220 230 >>NP_001308071 (OMIM: 612120,615238) cell death activato (238 aa) initn: 1574 init1: 1574 opt: 1574 Z-score: 2051.6 bits: 387.0 E(85289): 1.5e-107 Smith-Waterman score: 1574; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238) 10 20 30 40 50 60 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ 190 200 210 220 230 >>NP_071377 (OMIM: 612120,615238) cell death activator C (238 aa) initn: 1574 init1: 1574 opt: 1574 Z-score: 2051.6 bits: 387.0 E(85289): 1.5e-107 Smith-Waterman score: 1574; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238) 10 20 30 40 50 60 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 YSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 EQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGA 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_071 KRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ 190 200 210 220 230 >>NP_001186552 (OMIM: 612120,615238) cell death activato (251 aa) initn: 1574 init1: 1574 opt: 1574 Z-score: 2051.3 bits: 387.0 E(85289): 1.6e-107 Smith-Waterman score: 1574; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:14-251) 10 20 30 40 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRV ::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRNMESNAVQLTRMEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRV 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 STADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 STADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVF 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 MVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYD 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 TYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKAS 190 200 210 220 230 240 230 pF1KE6 SLIPTCLKILQ ::::::::::: NP_001 SLIPTCLKILQ 250 >>NP_001186480 (OMIM: 612120,615238) cell death activato (248 aa) initn: 1142 init1: 1142 opt: 1142 Z-score: 1488.8 bits: 282.9 E(85289): 3.5e-76 Smith-Waterman score: 1544; 96.0% identity (96.0% similar) in 248 aa overlap (1-238:1-248) 10 20 30 40 50 60 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMA 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 YSLEDLLLK----------VRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVL ::::::::: ::::::::::::::::::::::::::::::::::::::::: NP_001 YSLEDLLLKTRNPEARSQEVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE6 QKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYS 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 LSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLI 190 200 210 220 230 240 pF1KE6 PTCLKILQ :::::::: NP_001 PTCLKILQ >>NP_001308073 (OMIM: 612120,615238) cell death activato (164 aa) initn: 1111 init1: 1111 opt: 1111 Z-score: 1451.0 bits: 275.3 E(85289): 4.4e-74 Smith-Waterman score: 1111; 100.0% identity (100.0% similar) in 164 aa overlap (75-238:1-164) 50 60 70 80 90 100 pF1KE6 CRVSTADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGD :::::::::::::::::::::::::::::: NP_001 MLADKPFFLVLEEDGTTVETEEYFQALAGD 10 20 30 110 120 130 140 150 160 pF1KE6 TVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKAT 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE6 FYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKG 100 110 120 130 140 150 230 pF1KE6 KASSLIPTCLKILQ :::::::::::::: NP_001 KASSLIPTCLKILQ 160 >>NP_001308072 (OMIM: 612120,615238) cell death activato (164 aa) initn: 1111 init1: 1111 opt: 1111 Z-score: 1451.0 bits: 275.3 E(85289): 4.4e-74 Smith-Waterman score: 1111; 100.0% identity (100.0% similar) in 164 aa overlap (75-238:1-164) 50 60 70 80 90 100 pF1KE6 CRVSTADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGD :::::::::::::::::::::::::::::: NP_001 MLADKPFFLVLEEDGTTVETEEYFQALAGD 10 20 30 110 120 130 140 150 160 pF1KE6 TVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKAT 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE6 FYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKG 100 110 120 130 140 150 230 pF1KE6 KASSLIPTCLKILQ :::::::::::::: NP_001 KASSLIPTCLKILQ 160 >>NP_001270 (OMIM: 604440) cell death activator CIDE-A i (219 aa) initn: 595 init1: 310 opt: 597 Z-score: 779.8 bits: 151.5 E(85289): 1.1e-36 Smith-Waterman score: 597; 48.5% identity (74.2% similar) in 198 aa overlap (36-233:28-218) 10 20 30 40 50 60 pF1KE6 KSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRARPCRVSTADRSVRKGIMAYSLED .: ::: :::. ::: :.:.:: ::.. NP_001 MEAARDYAGALIRPLTFMGSQTKRVLFTPLMHPARPFRVSNHDRSSRRGVMASSLQE 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 LLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPPSEQGTR :. :. :.:..: ::::::::.:.:::.::.:. .: ::.:.:::::.: :.. NP_001 LISKTLDALVIATGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMP----GSQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 HPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCGAKRIMK : . : : :. .::::::::.:::.:::::::::::.:. ::.:::..: : : ... NP_001 HVPTCS--PPKRSGIARVTFDLYRLNPKDFIGCLNVKATMYEMYSVSYDIRCTGLKGLLR 120 130 140 150 160 170 190 200 210 220 230 pF1KE6 EAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ .:. .: :.::. :. . :. ..:: :: ...:.. . :: NP_001 SLLRFLSYSAQVTGQFLIYLGTYMLRVLDDKEERPSLRSQAKGRF-TCG 180 190 200 210 >>NP_001305312 (OMIM: 604440) cell death activator CIDE- (253 aa) initn: 595 init1: 310 opt: 597 Z-score: 778.9 bits: 151.6 E(85289): 1.2e-36 Smith-Waterman score: 598; 45.7% identity (71.0% similar) in 221 aa overlap (13-233:42-252) 10 20 30 40 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQLLSEPSPKAPRA : :: .. : . . :. .: : NP_001 NHNGSWAREGPRLGPSWKRGLWSPRGGPNRPAEPSRPLTFMGSQTKRVLF---TPLMHPA 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 RPCRVSTADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALA :: :::. ::: :.:.:: ::..:. :. :.:..: ::::::::.:.:::.::.:. NP_001 RPFRVSNHDRSSRRGVMASSLQELISKTLDALVIATGLVTLVLEEDGTVVDTEEFFQTLG 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 GDTVFMVLQKGQKWQPPSEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVK .: ::.:.:::::.: :..: . : : :. .::::::::.:::.::::::::: NP_001 DNTHFMILEKGQKWMP----GSQHVPTCS--PPKRSGIARVTFDLYRLNPKDFIGCLNVK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 ATFYDTYSLSYDLHCCGAKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPP ::.:. ::.:::..: : : ... .:. .: :.::. :. . :. ..:: :: NP_001 ATMYEMYSVSYDIRCTGLKGLLRSLLRFLSYSAQVTGQFLIYLGTYMLRVLDDKEERPSL 190 200 210 220 230 240 230 pF1KE6 KGKASSLIPTCLKILQ ...:.. . :: NP_001 RSQAKGRF-TCG 250 >>NP_001305736 (OMIM: 604441) cell death activator CIDE- (219 aa) initn: 532 init1: 261 opt: 545 Z-score: 712.1 bits: 139.0 E(85289): 6.3e-33 Smith-Waterman score: 545; 42.2% identity (68.4% similar) in 225 aa overlap (5-228:1-218) 10 20 30 40 50 pF1KE6 MEYAMKSLSLLYPKSLSRHVSVRTSVVTQQL-LSEPSPKAPRARPCRVSTADRSVRKGIM :. :: : :..: : :: .: ... : : :. :: :: :..:::. NP_001 MEYLSALNPSDLLRSVSNISSEFGRRVWTSAPPPQ----RPFRVCDHKRTIRKGLT 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 AYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAGDTVFMVLQKGQKWQPP : . ..:: :. .::.: . . ::::::::.:..:..:: : :: .::::.::.:.: NP_001 AATRQELLAKALETLLL-NGVLTLVLEEDGTAVDSEDFFQLLEDDTCLMVLQSGQSWSPT 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 SEQGTRHPLSLSHKPAKKIDVARVTFDLYKLNPQDFIGCLNVKATFYDTYSLSYDLHCCG . :. ..: .. :.:: :::.:: ::.:..: :::::::: ::.: :.. : NP_001 RSGVLSYGLG-RERPKHSKDIARFTFDVYKQNPRDLFGSLNVKATFYGLYSMSCDFQGLG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 AKRIMKEAFRWALFSMQATGHVLLGTSCYLQQLLDATEEGQPPKGKASSLIPTCLKILQ :....: .::. .:. ::.::: : :.. ....:. : ::. : NP_001 PKKVLRELLRWTSTLLQGLGHMLLGISSTLRHAVEGAEQWQQ-KGRLHSY 180 190 200 210 238 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:41:13 2016 done: Tue Nov 8 14:41:14 2016 Total Scan time: 4.370 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]