FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3057, 212 aa 1>>>pF1KE3057 212 - 212 aa - 212 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4865+/-0.000856; mu= 12.1206+/- 0.052 mean_var=60.9961+/-11.996, 0's: 0 Z-trim(106.0): 16 B-trim: 0 in 0/50 Lambda= 0.164219 statistics sampled from 8710 (8714) to 8710 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.659), E-opt: 0.2 (0.268), width: 16 Scan time: 2.110 The best scores are: opt bits E(32554) CCDS2552.1 DTYMK gene_id:1841|Hs108|chr2 ( 212) 1390 337.7 3.3e-93 >>CCDS2552.1 DTYMK gene_id:1841|Hs108|chr2 (212 aa) initn: 1390 init1: 1390 opt: 1390 Z-score: 1786.9 bits: 337.7 E(32554): 3.3e-93 Smith-Waterman score: 1390; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212) 10 20 30 40 50 60 pF1KE3 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS25 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA 130 140 150 160 170 180 190 200 210 pF1KE3 SKSIEAVHEDIRVLSEDAIRTATEKPLGELWK :::::::::::::::::::::::::::::::: CCDS25 SKSIEAVHEDIRVLSEDAIRTATEKPLGELWK 190 200 210 212 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:05:24 2016 done: Sun Nov 6 06:05:25 2016 Total Scan time: 2.110 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]