FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3007, 87 aa 1>>>pF1KE3007 87 - 87 aa - 87 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7590+/-0.000245; mu= 11.9384+/- 0.015 mean_var=62.1871+/-12.155, 0's: 0 Z-trim(121.7): 1 B-trim: 0 in 0/52 Lambda= 0.162639 statistics sampled from 38587 (38588) to 38587 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.822), E-opt: 0.2 (0.452), width: 16 Scan time: 3.920 The best scores are: opt bits E(85289) NP_056977 (OMIM: 602663) prolactin-releasing pepti ( 87) 606 149.3 7.5e-37 >>NP_056977 (OMIM: 602663) prolactin-releasing peptide p (87 aa) initn: 606 init1: 606 opt: 606 Z-score: 782.6 bits: 149.3 E(85289): 7.5e-37 Smith-Waterman score: 606; 100.0% identity (100.0% similar) in 87 aa overlap (1-87:1-87) 10 20 30 40 50 60 pF1KE3 MKVLRAWLLCLLMLGLALRGAASRTHRHSMEIRTPDINPAWYASRGIRPVGRFGRRRATL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MKVLRAWLLCLLMLGLALRGAASRTHRHSMEIRTPDINPAWYASRGIRPVGRFGRRRATL 10 20 30 40 50 60 70 80 pF1KE3 GDVPKPGLRPRLTCFPLEGGAMSSQDG ::::::::::::::::::::::::::: NP_056 GDVPKPGLRPRLTCFPLEGGAMSSQDG 70 80 87 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:54:42 2016 done: Tue Nov 8 04:54:42 2016 Total Scan time: 3.920 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]