FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5149, 92 aa 1>>>pF1KE5149 92 - 92 aa - 92 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0417+/-0.000323; mu= 10.7863+/- 0.020 mean_var=66.9994+/-13.996, 0's: 0 Z-trim(116.0): 1 B-trim: 0 in 0/55 Lambda= 0.156689 statistics sampled from 26766 (26767) to 26766 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.314), width: 16 Scan time: 3.530 The best scores are: opt bits E(85289) NP_000989 (OMIM: 613314) 60S ribosomal protein L37 ( 92) 612 146.3 6.5e-36 >>NP_000989 (OMIM: 613314) 60S ribosomal protein L37a [H (92 aa) initn: 612 init1: 612 opt: 612 Z-score: 765.7 bits: 146.3 E(85289): 6.5e-36 Smith-Waterman score: 612; 100.0% identity (100.0% similar) in 92 aa overlap (1-92:1-92) 10 20 30 40 50 60 pF1KE5 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSC 10 20 30 40 50 60 70 80 90 pF1KE5 MKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ :::::::::::::::::::::::::::::::: NP_000 MKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQ 70 80 90 92 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:21:09 2016 done: Tue Nov 8 07:21:10 2016 Total Scan time: 3.530 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]