(Linear) (Six-base) MAPSORT of: KIBB5790.seq Check: 1253 from: 1 to: 2331 KIBB5790.orf With 182 enzymes: SgfI * July 15, 2010 18:29 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 2080 2331 Size: 2080 251 AccI GT'mk_AC Cuts at: 0 1917 2331 Size: 1917 414 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 467 848 1441 1718 1982 2331 Size: 467 381 593 277 264 349 Fragments arranged by size: 593 467 381 349 277 264 AfeI AGC'GCT Cuts at: 0 2191 2331 Size: 2191 140 AflII C'TTAA_G Cuts at: 0 1774 2331 Size: 1774 557 AflIII A'CryG_T Cuts at: 0 1145 2331 Size: 1145 1186 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 231 263 2331 Size: 231 32 2068 Fragments arranged by size: 2068 231 32 AlwNI CAG_nnn'CTG Cuts at: 0 805 2331 Size: 805 1526 ApaI G_GGCC'C Cuts at: 0 105 2331 Size: 105 2226 ApoI r'AATT_y Cuts at: 0 336 420 541 654 682 1156 1894 1955 Size: 336 84 121 113 28 474 738 61 Cuts at: 1955 2331 Size: 376 Fragments arranged by size: 738 474 376 336 121 113 84 61 28 AvrII C'CTAG_G Cuts at: 0 382 2331 Size: 382 1949 BamHI G'GATC_C Cuts at: 0 38 2331 Size: 38 2293 BanI G'GyrC_C Cuts at: 0 94 1053 1415 2331 Size: 94 959 362 916 Fragments arranged by size: 959 916 362 94 BanII G_rGCy'C Cuts at: 0 105 2331 Size: 105 2226 BbsI GAAGACnn'nnnn_ Cuts at: 0 1724 2331 Size: 1724 607 BbvCI CC'TCA_GC Cuts at: 0 1233 1656 2331 Size: 1233 423 675 Fragments arranged by size: 1233 675 423 BciVI GTATCCnnnnn_n' Cuts at: 0 266 729 2331 Size: 266 463 1602 Fragments arranged by size: 1602 463 266 BclI T'GATC_A Cuts at: 0 2184 2331 Size: 2184 147 BglII A'GATC_T Cuts at: 0 601 2331 Size: 601 1730 BlpI GC'TnA_GC Cuts at: 0 524 848 2331 Size: 524 324 1483 Fragments arranged by size: 1483 524 324 Bme1580I G_kGCm'C Cuts at: 0 105 1058 1418 2331 Size: 105 953 360 913 Fragments arranged by size: 953 913 360 105 BmgBI CAC'GTC Cuts at: 0 2136 2331 Size: 2136 195 BmrI ACTGGGnnnn_n' Cuts at: 0 1694 2331 Size: 1694 637 BmtI G_CTAG'C Cuts at: 0 1664 2331 Size: 1664 667 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 151 732 848 1426 1539 2331 Size: 151 581 116 578 113 792 Fragments arranged by size: 792 581 578 151 116 113 Bpu10I CC'TnA_GC Cuts at: 0 1233 1656 2331 Size: 1233 423 675 Fragments arranged by size: 1233 675 423 BsaI GGTCTCn'nnnn_ Cuts at: 0 2166 2331 Size: 2166 165 BsaBI GATnn'nnATC Cuts at: 0 2183 2331 Size: 2183 148 BsaWI w'CCGG_w Cuts at: 0 81 2331 Size: 81 2250 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 1025 1055 2331 Size: 1025 30 1276 Fragments arranged by size: 1276 1025 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 1295 2331 Size: 1295 1036 BseYI C'CCAG_C Cuts at: 0 494 2331 Size: 494 1837 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 2181 2331 Size: 2181 150 BsiEI CG_ry'CG Cuts at: 0 126 2331 Size: 126 2205 BsiHKAI G_wGCw'C Cuts at: 0 203 525 1027 2331 Size: 203 322 502 1304 Fragments arranged by size: 1304 502 322 203 BsmI GAATG_Cn' Cuts at: 0 1016 2331 Size: 1016 1315 Bsp1286I G_dGCh'C Cuts at: 0 105 203 525 1027 1058 1418 2331 Size: 105 98 322 502 31 360 913 Fragments arranged by size: 913 502 360 322 105 98 31 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 2080 2331 Size: 2080 251 BsrBI CCG'CTC Cuts at: 0 44 2331 Size: 44 2287 BsrDI GCAATG_nn' Cuts at: 0 1072 1244 1390 2331 Size: 1072 172 146 941 Fragments arranged by size: 1072 941 172 146 BsrFI r'CCGG_y Cuts at: 0 26 2331 Size: 26 2305 BstAPI GCAn_nnn'nTGC Cuts at: 0 1053 2167 2331 Size: 1053 1114 164 Fragments arranged by size: 1114 1053 164 BstBI TT'CG_AA Cuts at: 0 333 2331 Size: 333 1998 BstYI r'GATC_y Cuts at: 0 38 601 2102 2331 Size: 38 563 1501 229 Fragments arranged by size: 1501 563 229 38 BtgI C'CryG_G Cuts at: 0 74 2331 Size: 74 2257 BtsI GCAGTG_nn' Cuts at: 0 1665 1728 2084 2331 Size: 1665 63 356 247 Fragments arranged by size: 1665 356 247 63 DrdI GACnn_nn'nnGTC Cuts at: 0 986 2331 Size: 986 1345 EaeI y'GGCC_r Cuts at: 0 966 2331 Size: 966 1365 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 60 2331 Size: 60 2271 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 151 467 732 848 1426 1441 1539 1718 Size: 151 316 265 116 578 15 98 179 Cuts at: 1718 1982 2331 Size: 264 349 Fragments arranged by size: 578 349 316 265 264 179 151 116 98 15 EcoRI G'AATT_C Cuts at: 0 420 1156 2331 Size: 420 736 1175 Fragments arranged by size: 1175 736 420 HaeII r_GCGC'y Cuts at: 0 2193 2331 Size: 2193 138 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 1212 1244 2331 Size: 1212 32 1087 Fragments arranged by size: 1212 1087 32 HindIII A'AGCT_T Cuts at: 0 328 479 1400 2331 Size: 328 151 921 931 Fragments arranged by size: 931 921 328 151 MscI TGG'CCA Cuts at: 0 968 2331 Size: 968 1363 MslI CAynn'nnrTG Cuts at: 0 350 1098 2331 Size: 350 748 1233 Fragments arranged by size: 1233 748 350 MspA1I CmG'CkG Cuts at: 0 1998 2331 Size: 1998 333 NcoI C'CATG_G Cuts at: 0 74 2331 Size: 74 2257 NdeI CA'TA_TG Cuts at: 0 537 2331 Size: 537 1794 NheI G'CTAG_C Cuts at: 0 1660 2331 Size: 1660 671 NspI r_CATG'y Cuts at: 0 1149 1519 1916 2331 Size: 1149 370 397 415 Fragments arranged by size: 1149 415 397 370 PciI A'CATG_T Cuts at: 0 1145 2331 Size: 1145 1186 PfoI T'CCnGG_A Cuts at: 0 46 2331 Size: 46 2285 PspOMI G'GGCC_C Cuts at: 0 101 2331 Size: 101 2230 PstI C_TGCA'G Cuts at: 0 567 2091 2331 Size: 567 1524 240 Fragments arranged by size: 1524 567 240 PvuII CAG'CTG Cuts at: 0 1998 2331 Size: 1998 333 SexAI A'CCwGG_T Cuts at: 0 1173 2331 Size: 1173 1158 SfcI C'TryA_G Cuts at: 0 210 563 726 2087 2331 Size: 210 353 163 1361 244 Fragments arranged by size: 1361 353 244 210 163 SmlI C'TyrA_G Cuts at: 0 1774 2331 Size: 1774 557 StyI C'CwwG_G Cuts at: 0 74 382 2331 Size: 74 308 1949 Fragments arranged by size: 1949 308 74 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 2252 2331 Size: 2252 79 TatI w'GTAC_w Cuts at: 0 157 1710 1804 2331 Size: 157 1553 94 527 Fragments arranged by size: 1553 527 157 94 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 236 268 2331 Size: 236 32 2063 Fragments arranged by size: 2063 236 32 Enzymes that do cut: AarI AccI AcuI AfeI AflII AflIII AloI AlwNI ApaI ApoI AvrII BamHI BanI BanII BbsI BbvCI BciVI BclI BglII BlpI Bme1580I BmgBI BmrI BmtI BpmI Bpu10I BsaI BsaBI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspMI BsrBI BsrDI BsrFI BstAPI BstBI BstYI BtgI BtsI DrdI EaeI EciI Eco57MI EcoRI HaeII Hin4I HindIII MscI MslI MspA1I NcoI NdeI NheI NspI PciI PfoI PspOMI PstI PvuII SexAI SfcI SmlI StyI TaqII TatI TstI Enzymes that do not cut: AatII Acc65I AclI AgeI AhdI AleI AlfI ApaLI AscI AseI AsiSI AvaI BaeI BbeI BcgI BfrBI BglI BplI BpuEI BsaAI BsaHI BsiWI BsmBI BspEI BspHI BsrGI BssHII BssSI BstEII BstXI BstZ17I Bsu36I BtgZI ClaI CspCI DraI DraIII EagI EarI EcoICRI EcoNI EcoO109I EcoRV FalI FseI FspI FspAI HincII HpaI KasI KpnI MfeI MluI MmeI NaeI NarI NgoMIV NotI NruI NsiI PacI PasI PflMI PmeI PmlI PpiI PpuMI PshAI PsiI PspXI PsrI PvuI RsrII SacI SacII SalI SanDI SapI SbfI ScaI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI Tth111I XbaI XcmI XhoI XmaI XmnI ZraI