FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5323, 283 aa 1>>>pF1KE5323 283 - 283 aa - 283 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5944+/-0.000917; mu= 6.5858+/- 0.055 mean_var=204.1737+/-42.547, 0's: 0 Z-trim(112.9): 109 B-trim: 778 in 1/51 Lambda= 0.089758 statistics sampled from 13447 (13571) to 13447 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.755), E-opt: 0.2 (0.417), width: 16 Scan time: 2.640 The best scores are: opt bits E(32554) CCDS2325.1 BOLL gene_id:66037|Hs108|chr2 ( 283) 1946 264.0 9e-71 CCDS2324.1 BOLL gene_id:66037|Hs108|chr2 ( 295) 1946 264.0 9.2e-71 CCDS63081.1 BOLL gene_id:66037|Hs108|chr2 ( 174) 1171 163.4 1e-40 >>CCDS2325.1 BOLL gene_id:66037|Hs108|chr2 (283 aa) initn: 1946 init1: 1946 opt: 1946 Z-score: 1384.1 bits: 264.0 E(32554): 9e-71 Smith-Waterman score: 1946; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:1-283) 10 20 30 40 50 60 pF1KE5 MQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 MQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 EVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPAIRKQQVGIPRSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 IMPAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 IMPAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 YHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGGCVPPPLSLMETS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 YHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGGCVPPPLSLMETS 190 200 210 220 230 240 250 260 270 280 pF1KE5 VPEPYSDHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY ::::::::::::::::::::::::::::::::::::::::::: CCDS23 VPEPYSDHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY 250 260 270 280 >>CCDS2324.1 BOLL gene_id:66037|Hs108|chr2 (295 aa) initn: 1946 init1: 1946 opt: 1946 Z-score: 1383.9 bits: 264.0 E(32554): 9.2e-71 Smith-Waterman score: 1946; 100.0% identity (100.0% similar) in 283 aa overlap (1-283:13-295) 10 20 30 40 pF1KE5 MQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESD :::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 METESGPQTSNQMQTDSLSPSPNPVSPVPLNNPTSAPRYGTVIPNRIFVGGIDFKTNESD 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE5 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 LRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDKKLNIGPA 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE5 IRKQQVGIPRSSIMPAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 IRKQQVGIPRSSIMPAAGTMYLTTSTGYPYTYHNGVAYFHTPEVTSVPPPWPSRSVCSSP 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE5 VMVAQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 VMVAQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASSAPFLYLQPSEVIYQPVEIAQDGG 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE5 CVPPPLSLMETSVPEPYSDHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 CVPPPLSLMETSVPEPYSDHGVQATYHQVYAPSAITMPAPVMQPEPIKTVWSIHY 250 260 270 280 290 >>CCDS63081.1 BOLL gene_id:66037|Hs108|chr2 (174 aa) initn: 1170 init1: 1170 opt: 1171 Z-score: 844.3 bits: 163.4 E(32554): 1e-40 Smith-Waterman score: 1171; 98.8% identity (99.4% similar) in 168 aa overlap (117-283:7-174) 90 100 110 120 130 140 pF1KE5 QKILQEAEKLNYKDKKLNIGPAIRKQQVGIPR-SSIMPAAGTMYLTTSTGYPYTYHNGVA :. ::::::::::::::::::::::::::: CCDS63 MTELEYPKGSSIMPAAGTMYLTTSTGYPYTYHNGVA 10 20 30 150 160 170 180 190 200 pF1KE5 YFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 YFHTPEVTSVPPPWPSRSVCSSPVMVAQPIYQQPAYHYQATTQYLPGQWQWSVPQPSASS 40 50 60 70 80 90 210 220 230 240 250 260 pF1KE5 APFLYLQPSEVIYQPVEIAQDGGCVPPPLSLMETSVPEPYSDHGVQATYHQVYAPSAITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 APFLYLQPSEVIYQPVEIAQDGGCVPPPLSLMETSVPEPYSDHGVQATYHQVYAPSAITM 100 110 120 130 140 150 270 280 pF1KE5 PAPVMQPEPIKTVWSIHY :::::::::::::::::: CCDS63 PAPVMQPEPIKTVWSIHY 160 170 283 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:32:27 2016 done: Tue Nov 8 07:32:28 2016 Total Scan time: 2.640 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]