Result of FASTA (omim) for pFN21AB9706
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9706, 338 aa
  1>>>pF1KB9706 338 - 338 aa - 338 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.7630+/-0.000423; mu= -2.7563+/- 0.027
 mean_var=553.7968+/-113.029, 0's: 0 Z-trim(126.0): 126  B-trim: 992 in 1/58
 Lambda= 0.054500
 statistics sampled from 50785 (50924) to 50785 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.838), E-opt: 0.2 (0.597), width:  16
 Scan time:  6.730

The best scores are:                                      opt bits E(85289)
NP_067015 (OMIM: 142986) homeobox protein Hox-D11  ( 338) 2388 201.4 2.3e-51
NP_055027 (OMIM: 605559) homeobox protein Hox-C11  ( 304)  643 64.2 4.2e-10
NP_005514 (OMIM: 142958,605432) homeobox protein H ( 313)  547 56.6 8.1e-08
NP_061824 (OMIM: 142957) homeobox protein Hox-A10  ( 410)  400 45.2 0.00029
NP_076922 (OMIM: 142964) homeobox protein Hox-B9 [ ( 250)  368 42.4  0.0012
NP_059105 (OMIM: 605560) homeobox protein Hox-C10  ( 342)  362 42.1   0.002
NP_689952 (OMIM: 142956) homeobox protein Hox-A9 [ ( 272)  350 41.1  0.0034
NP_055028 (OMIM: 142982) homeobox protein Hox-D9 [ ( 352)  343 40.7  0.0058
NP_008828 (OMIM: 142971) homeobox protein Hox-C9 [ ( 260)  339 40.2  0.0061


>>NP_067015 (OMIM: 142986) homeobox protein Hox-D11 [Hom  (338 aa)
 initn: 2388 init1: 2388 opt: 2388  Z-score: 1043.3  bits: 201.4 E(85289): 2.3e-51
Smith-Waterman score: 2388; 100.0% identity (100.0% similar) in 338 aa overlap (1-338:1-338)

               10        20        30        40        50        60
pF1KB9 MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQPSSCQMTFPYSSNLAPHVQPVRE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQPSSCQMTFPYSSNLAPHVQPVRE
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 VAFRDYGLERAKWPYRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 VAFRDYGLERAKWPYRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 EEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQGFDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 EEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQGFDQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 FYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 FYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEG
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 SGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 SGGDGEGPPGEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLS
              250       260       270       280       290       300

              310       320       330        
pF1KB9 RMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF
       ::::::::::::::::::::::::::::::::::::::
NP_067 RMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF
              310       320       330        

>>NP_055027 (OMIM: 605559) homeobox protein Hox-C11 [Hom  (304 aa)
 initn: 833 init1: 466 opt: 643  Z-score: 302.3  bits: 64.2 E(85289): 4.2e-10
Smith-Waterman score: 795; 44.5% identity (66.1% similar) in 339 aa overlap (3-338:21-304)

                                 10        20        30        40  
pF1KB9                   MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQPSSCQ
                           :: : :. :...:::.:.::. : .:..  ::: :  : :
NP_055 MFNSVNLGNFCSPSRKERGADFGERGSCASNLYLPSCTYYM-P-EFSTVSSFLPQAPSRQ
               10        20        30        40          50        

             50        60         70        80        90       100 
pF1KB9 MTFPYSSNLAPHVQPVREVAFRDYGLE-RAKWPYRGGGGGGSAGGGSSGGGPGGGGGGAG
       ...:::.    .: :::::.   ::::  .:: .:..                       
NP_055 ISYPYSA----QVPPVREVS---YGLEPSGKWHHRNS-----------------------
       60            70           80                               

             110       120       130       140       150       160 
pF1KB9 GYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAA
        :.  ::::           .  :.:: :::.    ..:.:  :   ..   : .: .. 
NP_055 -YSSCYAAA-----------DELMHRECLPPS-TVTEILMKN-EGSYGGHHHPSAPHATP
        90                  100        110        120       130    

             170       180       190       200       210       220 
pF1KB9 SNFYSAVGRNGILPQGFDQFYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGG
       ..:::.:..:..:::.::.:.. :    . :   ::   : . .: : ::.:..  ..: 
NP_055 AGFYSSVNKNSVLPQAFDRFFDNA----YCGGGDPPAEPPCSGKGEA-KGEPEAPPASGL
          140       150           160       170        180         

             230       240       250       260         270         
pF1KB9 GSPCTKATPGSEPKGAAEGSGGDGEGPPGEAGAEKSSSAVAPQ--RSRKKRCPYTKYQIR
       .:   .:  :.: ..  :... .. :    .. : ...: ::.  :.:::::::.:.:::
NP_055 AS---RAEAGAEAEAEEENTNPSSSGSAHSVAKEPAKGA-APNAPRTRKKRCPYSKFQIR
     190          200       210       220        230       240     

     280       290       300       310       320       330        
pF1KB9 ELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF
       :::::::::::::::::::::::::::::::::::::::::::::.:::::::.::::.
NP_055 ELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYFSGNPLL
         250       260       270       280       290       300    

>>NP_005514 (OMIM: 142958,605432) homeobox protein Hox-A  (313 aa)
 initn: 899 init1: 507 opt: 547  Z-score: 261.4  bits: 56.6 E(85289): 8.1e-08
Smith-Waterman score: 900; 48.3% identity (63.8% similar) in 356 aa overlap (3-338:2-313)

               10        20        30         40        50         
pF1KB9 MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQ-PSSCQMTFPYSSNLAPHVQPVR
         :::: :  ...::::.:.:::.  ::.: :::: : :::  ::. ::::: :.:::::
NP_005  MDFDERGPCSSNMYLPSCTYYVSGPDFSSLPSFLPQTPSSRPMTYSYSSNL-PQVQPVR
                10        20        30        40        50         

      60        70         80        90       100       110        
pF1KB9 EVAFRDYGLERA-KWPYRGGGGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAA
       ::.::.:..: : ::  ::.                                    :   
NP_005 EVTFREYAIEPATKWHPRGN-----------------------------------LAHCY
       60        70                                           80   

      120       130         140       150       160       170      
pF1KB9 AAEEAAMQRELLPP--AGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYSAVGRNGILPQ
       .::: . .  :  :  ::   ::: :.   :   : :     ...:::::.:::::.:::
NP_005 SAEELVHRDCLQAPSAAGVPGDVLAKSSANVYHHPTP-----AVSSNFYSTVGRNGVLPQ
            90       100       110       120            130        

        180              190            200       210          220 
pF1KB9 GFDQFYEAAPGPP-------FAGPQ-----PPPPPAPPQPEGAADKGDPRTGA---GGGG
       .::::.:.: : :       . : .     ::   :     .::  : : :..   ::::
NP_005 AFDQFFETAYGTPENLASSDYPGDKSAEKGPPAATATSAAAAAAATGAPATSSSDSGGGG
      140       150       160       170       180       190        

             230       240       250        260       270       280
pF1KB9 GSPCTKATPGSEPKGAAEGSGGDGEGPPGEAG-AEKSSSAVAPQRSRKKRCPYTKYQIRE
       :  : ... ..: :   .    .. .: . .: .: .... . ::.::::::::::::::
NP_005 G--CRETAAAAEEK-ERRRRPESSSSPESSSGHTEDKAGGSSGQRTRKKRCPYTKYQIRE
        200       210        220       230       240       250     

              290       300       310       320       330        
pF1KB9 LEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF
       :::::::.:::::::::::::::::::::::::::::::::::.:::::::...:::.
NP_005 LEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKINRDRLQYYSANPLL
         260       270       280       290       300       310   

>>NP_061824 (OMIM: 142957) homeobox protein Hox-A10 [Hom  (410 aa)
 initn: 571 init1: 314 opt: 400  Z-score: 197.7  bits: 45.2 E(85289): 0.00029
Smith-Waterman score: 416; 33.6% identity (50.8% similar) in 354 aa overlap (66-335:73-406)

          40        50        60        70         80        90    
pF1KB9 SQPSSCQMTFPYSSNLAPHVQPVREVAFRDYGLERAK-WPYRGGGGGGSAGGGSSGGGPG
                                     :::.    .:  ::  . .:. ::.::: :
NP_061 GGGGGGAGGGGGGGYYAHGGVYLPPAADLPYGLQSCGLFPTLGGKRNEAASPGSGGGG-G
             50        60        70        80        90       100  

          100       110       120       130       140       150    
pF1KB9 GGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPP
       : : :: ::.:         .      .:  . .. :: :  :    . : :    : ::
NP_061 GLGPGAHGYGP---------SPIDLWLDAPRSCRMEPPDGPPPPPQQQPPPP----PQPP
             110                120       130       140            

           160       170         180           190                 
pF1KB9 H-GPAGAASNFYSAVGRNG--ILPQGFDQFYE----AAPGPPFAGPQPPPP---------
       . .: ... .: . . ...   : .. :.  .    ::   ::  :. :::         
NP_061 QPAPQATSCSFAQNIKEESSYCLYDSADKCPKVSATAAELAPF--PRGPPPDGCALGTSS
      150       160       170       180       190         200      

        200            210       220            230          240   
pF1KB9 --PAP-----PQPEGAADKGDPRTGAGGGGGS-----PCTKATPG---SEPKGAAEGSG-
         :.:      :  :.: ::    :.::::..     :     ::   . : . : ::. 
NP_061 GVPVPGYFRLSQAYGTA-KG---YGSGGGGAQQLGAGPFPAQPPGRGFDLPPALASGSAD
        210       220           230       240       250       260  

                              250       260                        
pF1KB9 ------------------GDGEGPPGEAGAEKSSSAV-----APQRS-------------
                         :.: :  :.  :. ::::.     ::..:             
NP_061 AARKERALDSPPPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNS
            270       280       290       300       310       320  

                      270       280       290       300       310  
pF1KB9 --------------RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKI
                     :::::::::.:  :::.::.::.:...:.::..:: ..::::::::
NP_061 KGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKI
            330       340       350       360       370       380  

            320        330         
pF1KB9 WFQNRRMKEKKLNRD-RLQYFTGNPLF 
       :::::::: ::.::. :.. .:.:    
NP_061 WFQNRRMKLKKMNRENRIRELTANFNFS
            390       400       410

>>NP_076922 (OMIM: 142964) homeobox protein Hox-B9 [Homo  (250 aa)
 initn: 369 init1: 312 opt: 368  Z-score: 186.3  bits: 42.4 E(85289): 0.0012
Smith-Waterman score: 388; 38.2% identity (59.3% similar) in 204 aa overlap (137-328:48-247)

        110       120       130       140       150       160      
pF1KB9 YAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGPPHGPAGAASNFYS
                                     :.  :.   :: .:   : .:   ::.   
NP_076 HESEDAPPAKFPSGQYASSRQPGHAEHLEFPSCSFQPKAPVFGASWAPLSPH--ASGSLP
        20        30        40        50        60          70     

        170       180       190       200       210          220   
pF1KB9 AVGRNGILPQGFDQFYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDPRTGAGG---GGGS
       .: .  : :::     :.     .  : :    :: : . :: :..:  :: :     :.
NP_076 SVYHPYIQPQGVPP-AESRYLRTWLEPAPRGEAAPGQGQ-AAVKAEPLLGAPGELLKQGT
          80         90       100       110        120       130   

             230       240        250             260       270    
pF1KB9 P--CTKATPGSEPKGAAEGSG-GDGEGPPGEAGAEK------SSSAVAPQRSRKKRCPYT
       :    ... : :   . .  : ::..   :    :.      :.. .  . :::::::::
NP_076 PEYSLETSAGREAVLSNQRPGYGDNKICEGSEDKERPDQTNPSANWLHARSSRKKRCPYT
           140       150       160       170       180       190   

          280       290       300       310       320       330    
pF1KB9 KYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLNRDRLQYFTG
       :::  :::.::.::.:.....: ...:.:::..::::::::::::: ::.:...      
NP_076 KYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNKEQGKE   
           200       210       220       230       240       250   

           
pF1KB9 NPLF

>>NP_059105 (OMIM: 605560) homeobox protein Hox-C10 [Hom  (342 aa)
 initn: 391 init1: 318 opt: 362  Z-score: 182.3  bits: 42.1 E(85289): 0.002
Smith-Waterman score: 362; 34.9% identity (60.0% similar) in 235 aa overlap (112-335:115-338)

              90       100       110       120       130           
pF1KB9 GSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPA--GRR--P
                                     .:   : .. :::.  . :: .  :..  :
NP_059 AYRLEQPVGRPLSSCSYPPSVKEENVCCMYSAEKRAKSGPEAALYSHPLPESCLGEHEVP
           90       100       110       120       130       140    

        140       150       160        170       180       190     
pF1KB9 -DVLFKAPEPVCAAPGPPHGPAGAASNFYSAV-GRNGILPQGFDQFYEAAPGPPFAGPQP
           ..:     :    ::   ..:..: .    : .. :..     :   .: ..:   
NP_059 VPSYYRASPSYSALDKTPH--CSGANDFEAPFEQRASLNPRA-----EHLESPQLGGKVS
          150       160         170       180            190       

          200       210       220       230       240         250  
pF1KB9 -PPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSG--GDGEGPPGEA
        :  :   .   . ..   . . .:  :::  .    .:   ::..:   .:.:.   : 
NP_059 FPETPKSDSQTPSPNEIKTEQSLAGPKGSPSESE---KERAKAADSSPDTSDNEAKE-EI
       200       210       220       230          240       250    

            260        270       280       290       300       310 
pF1KB9 GAEKSSSAVAPQRS-RKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVK
        ::....     .: :::::::::.:  :::.::.::.:...:.::..:. .::::::::
NP_059 KAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTDRQVK
           260       270       280       290       300       310   

             320        330         
pF1KB9 IWFQNRRMKEKKLNRD-RLQYFTGNPLF 
       ::::::::: ::.::. :.. .:.:    
NP_059 IWFQNRRMKLKKMNRENRIRELTSNFNFT
           320       330       340  

>>NP_689952 (OMIM: 142956) homeobox protein Hox-A9 [Homo  (272 aa)
 initn: 394 init1: 319 opt: 350  Z-score: 178.3  bits: 41.1 E(85289): 0.0034
Smith-Waterman score: 368; 40.2% identity (66.9% similar) in 169 aa overlap (175-328:103-268)

          150       160       170         180        190        200
pF1KB9 EPVCAAPGPPHGPAGAASNFYSAVGRNGILPQG--FDQFYEAAPGP-PFAG-PQPPPPPA
                                     :.:  . .. : .::   ::: :.  :   
NP_689 AGANAVPAAVYHHHHHHPYVHPQAPVAAAAPDGRYMRSWLEPTPGALSFAGLPSSRPYGI
             80        90       100       110       120       130  

              210              220           230       240         
pF1KB9 PPQPEGAADKGD-PRTGAGG------GGGSPCT----KATPGSEPKGAAEGSGGDGEGPP
        :.:  .: .:: :   .        . ::: .    . . :.  .. ::. .: :. ::
NP_689 KPEPL-SARRGDCPTLDTHTLSLTDYACGSPPVDREKQPSEGAFSENNAENESG-GDKPP
             140       150       160       170       180        190

     250       260       270       280       290       300         
pF1KB9 GEAGAEKSSSAVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQ
        . . . ... .  . .:::::::::.:  :::.::.::.:.....: ...:.::::.::
NP_689 IDPN-NPAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQ
               200       210       220       230       240         

     310       320       330        
pF1KB9 VKIWFQNRRMKEKKLNRDRLQYFTGNPLF
       ::::::::::: ::.:.::          
NP_689 VKIWFQNRRMKMKKINKDRAKDE      
     250       260       270        

>>NP_055028 (OMIM: 142982) homeobox protein Hox-D9 [Homo  (352 aa)
 initn: 467 init1: 310 opt: 343  Z-score: 174.1  bits: 40.7 E(85289): 0.0058
Smith-Waterman score: 404; 29.7% identity (52.3% similar) in 333 aa overlap (8-328:55-347)

                                      10        20        30       
pF1KB9                        MNDFDECGQSAASMYLPGCAYYVAPSDFASKPSFLSQ
                                     : .:..  . .:..  :: . . . :. . 
NP_055 LIGHEGDEVFAARFGPPGPGAQGRPAGVADGPAATAAEFASCSF--APRSAVFSASWSAV
           30        40        50        60          70        80  

        40        50        60         70          80        90    
pF1KB9 PSSCQMTFPYSSNLAPHVQPVREVAF-RDYGLERAKW--PYRGGGGGGSAGGGSSGGGPG
       ::.   .  .:.   :.: :   .:   . :    .:  :  :  ::...:::..:::::
NP_055 PSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEPLPGFPGGAGGGGGGGGGGPG
             90       100       110       120       130       140  

           100       110       120       130       140       150   
pF1KB9 -GGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPEPVCAAPGP
        : . : .:                            :  ::.  .    ::   :::.:
NP_055 RGPSPGPSG----------------------------PANGRHYGI---KPETR-AAPAP
            150                                   160           170

           160       170       180       190       200       210   
pF1KB9 PHGPAGAASNFYSAVGRNGILPQGFDQFYEAAPGPPFAGPQPPPPPAPPQPEGAADKGDP
         . . ..:.  :  . .     .  .  ... :: :.        .  : ..::  :  
NP_055 ATAASTTSSSSTSLSSSSKRTECSVARESQGSSGPEFSCN------SFLQEKAAAATGGT
              180       190       200       210             220    

                220       230       240       250       260        
pF1KB9 RTGAG-----GGGGSPCTKATPGSEPKGAAEGSGGDGEGPPGEAGAEKSSSA---VAPQR
         :::     : :::   .:       : .       .. : .   . .. :   .  . 
NP_055 GPGAGIGAATGTGGSSEPSACSDHPIPGCSLKEEEKQHSQPQQQQLDPNNPAANWIHARS
          230       240       250       260       270       280    

         270       280       290       300       310       320     
pF1KB9 SRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLN
       .:::::::::::  :::.::.::.:.....: ...:.::::.::::::::::::: ::..
NP_055 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMS
          290       300       310       320       330       340    

         330        
pF1KB9 RDRLQYFTGNPLF
       ...          
NP_055 KEKCPKGD     
          350       

>>NP_008828 (OMIM: 142971) homeobox protein Hox-C9 [Homo  (260 aa)
 initn: 362 init1: 312 opt: 339  Z-score: 173.8  bits: 40.2 E(85289): 0.0061
Smith-Waterman score: 357; 34.5% identity (57.4% similar) in 235 aa overlap (116-328:30-254)

          90       100       110       120       130       140     
pF1KB9 GGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPDVLFKAPE
                                     :..:   ::    :.:  .  :.  : ::.
NP_008  MSATGPISNYYVDSLISHDNEDLLASRFPATGAHPAAARPSGLVPDCSDFPSCSF-APK
                10        20        30        40        50         

             150                  160       170        180         
pF1KB9 PVCA----APGP--------PHGPA---GAASNFYSAVGRNGILP-QGFDQFYEAAPGPP
       :.      :: :        :.::    :: . ..    :. . : .:  .:    :. :
NP_008 PAVFSTSWAPVPSQSSVVYHPYGPQPHLGADTRYM----RTWLEPLSGAVSF----PSFP
       60        70        80        90           100           110

     190        200       210       220         230       240      
pF1KB9 FAGPQPP-PPPAPPQPEGAADKGDPRTGAGGGGGSP--CTKATPGSEPKGAAEGSGGDGE
        .: .    : : :  ..    :. :.      :::      .: . :.  :.. .:. .
NP_008 AGGRHYALKPDAYPGRRADCGPGEGRSYPDYMYGSPGELRDRAPQTLPSPEADALAGS-K
              120       130       140       150       160          

        250       260          270       280       290       300   
pF1KB9 GPPGEAGAEKSSSA---VAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRML
           .:  . :. .   .  . .:::::::::::  :::.::.::.:.....: ...:.:
NP_008 HKEEKADLDPSNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVL
     170       180       190       200       210       220         

           310       320       330        
pF1KB9 NLTDRQVKIWFQNRRMKEKKLNRDRLQYFTGNPLF
       :::.::::::::::::: ::.:...          
NP_008 NLTERQVKIWFQNRRMKMKKMNKEKTDKEQS    
     230       240       250       260    




338 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 04:26:28 2016 done: Tue Nov  8 04:26:29 2016
 Total Scan time:  6.730 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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