FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6182, 142 aa 1>>>pF1KE6182 142 - 142 aa - 142 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7645+/-0.00084; mu= 9.2641+/- 0.050 mean_var=66.4009+/-13.622, 0's: 0 Z-trim(106.9): 18 B-trim: 0 in 0/51 Lambda= 0.157394 statistics sampled from 9218 (9231) to 9218 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.284), width: 16 Scan time: 1.090 The best scores are: opt bits E(32554) CCDS2263.1 ATP5G3 gene_id:518|Hs108|chr2 ( 142) 896 211.8 1.1e-55 CCDS81694.1 ATP5G2 gene_id:517|Hs108|chr12 ( 141) 638 153.2 4.9e-38 CCDS31812.1 ATP5G2 gene_id:517|Hs108|chr12 ( 157) 638 153.2 5.4e-38 CCDS8863.2 ATP5G2 gene_id:517|Hs108|chr12 ( 198) 638 153.3 6.6e-38 CCDS11539.1 ATP5G1 gene_id:516|Hs108|chr17 ( 136) 586 141.4 1.7e-34 >>CCDS2263.1 ATP5G3 gene_id:518|Hs108|chr2 (142 aa) initn: 896 init1: 896 opt: 896 Z-score: 1113.0 bits: 211.8 E(32554): 1.1e-55 Smith-Waterman score: 896; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142) 10 20 30 40 50 60 pF1KE6 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 70 80 90 100 110 120 130 140 pF1KE6 FALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::: CCDS22 FALSEAMGLFCLMVAFLILFAM 130 140 >>CCDS81694.1 ATP5G2 gene_id:517|Hs108|chr12 (141 aa) initn: 645 init1: 525 opt: 638 Z-score: 796.4 bits: 153.2 E(32554): 4.9e-38 Smith-Waterman score: 638; 74.6% identity (86.6% similar) in 142 aa overlap (1-142:1-141) 10 20 30 40 50 60 pF1KE6 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF ::::.:.. ::::... :.. ::.:: ::.::: : :. . . . .: . .: : CCDS81 MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEIL-TDESLSSLAVSCPLTSLVSSRSF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 60 70 80 90 100 110 130 140 pF1KE6 FALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::: CCDS81 FALSEAMGLFCLMVAFLILFAM 120 130 140 >>CCDS31812.1 ATP5G2 gene_id:517|Hs108|chr12 (157 aa) initn: 645 init1: 525 opt: 638 Z-score: 795.6 bits: 153.2 E(32554): 5.4e-38 Smith-Waterman score: 638; 74.6% identity (86.6% similar) in 142 aa overlap (1-142:17-157) 10 20 30 40 pF1KE6 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTV ::::.:.. ::::... :.. ::.:: ::.::: : :. . CCDS31 MPELILSPATAPHPLKMFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEIL-TDESLSS 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 FNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYA . . .: . .: ::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYA 60 70 80 90 100 110 110 120 130 140 pF1KE6 RNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::::::::::::::::::: CCDS31 RNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM 120 130 140 150 >>CCDS8863.2 ATP5G2 gene_id:517|Hs108|chr12 (198 aa) initn: 645 init1: 525 opt: 638 Z-score: 794.0 bits: 153.3 E(32554): 6.6e-38 Smith-Waterman score: 638; 74.6% identity (86.6% similar) in 142 aa overlap (1-142:58-198) 10 20 30 pF1KE6 MFACAKLACTPSLIRAGSRVAYRPISASVL ::::.:.. ::::... :.. ::.:: :: CCDS88 PSFRSSRCSAPLCLLCSGSSSPATAPHPLKMFACSKFVSTPSLVKSTSQLLSRPLSAVVL 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE6 SRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGA .::: : :. . . . .: . .: ::::::::::::::::::::::::::::::: CCDS88 KRPEIL-TDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGA 90 100 110 120 130 140 100 110 120 130 140 pF1KE6 GIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS88 GIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFAM 150 160 170 180 190 >>CCDS11539.1 ATP5G1 gene_id:516|Hs108|chr17 (136 aa) initn: 603 init1: 533 opt: 586 Z-score: 732.8 bits: 141.4 E(32554): 1.7e-34 Smith-Waterman score: 586; 70.4% identity (79.6% similar) in 142 aa overlap (1-142:1-136) 10 20 30 40 50 60 pF1KE6 MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF : . . : .:.::: .: ::.::: :. : : . . : :. .::: CCDS11 MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP------LQVARREF 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG :::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 60 70 80 90 100 110 130 140 pF1KE6 FALSEAMGLFCLMVAFLILFAM :::::::::::::::::::::: CCDS11 FALSEAMGLFCLMVAFLILFAM 120 130 142 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:09:29 2016 done: Tue Nov 8 10:09:29 2016 Total Scan time: 1.090 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]