FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3227, 520 aa 1>>>pF1KE3227 520 - 520 aa - 520 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5574+/-0.000471; mu= 16.5947+/- 0.029 mean_var=66.2352+/-13.481, 0's: 0 Z-trim(108.6): 27 B-trim: 77 in 1/48 Lambda= 0.157590 statistics sampled from 16653 (16667) to 16653 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.554), E-opt: 0.2 (0.195), width: 16 Scan time: 7.290 The best scores are: opt bits E(85289) NP_079276 (OMIM: 241080,612515) DDB1- and CUL4-ass ( 520) 3501 805.5 0 XP_006712830 (OMIM: 241080,612515) PREDICTED: DDB1 ( 433) 2909 670.9 2.1e-192 XP_006712831 (OMIM: 241080,612515) PREDICTED: DDB1 ( 433) 2909 670.9 2.1e-192 XP_016860484 (OMIM: 241080,612515) PREDICTED: DDB1 ( 385) 2480 573.3 4.3e-163 XP_016860485 (OMIM: 241080,612515) PREDICTED: DDB1 ( 372) 2216 513.3 4.9e-145 NP_001158293 (OMIM: 241080,612515) DDB1- and CUL4- ( 453) 2213 512.7 9.4e-145 XP_016860486 (OMIM: 241080,612515) PREDICTED: DDB1 ( 332) 2207 511.3 1.8e-144 XP_016860487 (OMIM: 241080,612515) PREDICTED: DDB1 ( 294) 2004 465.1 1.3e-130 XP_016860491 (OMIM: 241080,612515) PREDICTED: DDB1 ( 273) 1635 381.2 2.2e-105 XP_011510183 (OMIM: 241080,612515) PREDICTED: DDB1 ( 509) 1637 381.7 2.8e-105 XP_011510184 (OMIM: 241080,612515) PREDICTED: DDB1 ( 499) 1635 381.3 3.7e-105 XP_016860489 (OMIM: 241080,612515) PREDICTED: DDB1 ( 286) 1608 375.0 1.6e-103 XP_016860490 (OMIM: 241080,612515) PREDICTED: DDB1 ( 286) 1608 375.0 1.6e-103 XP_016860488 (OMIM: 241080,612515) PREDICTED: DDB1 ( 286) 1608 375.0 1.6e-103 >>NP_079276 (OMIM: 241080,612515) DDB1- and CUL4-associa (520 aa) initn: 3501 init1: 3501 opt: 3501 Z-score: 4301.4 bits: 805.5 E(85289): 0 Smith-Waterman score: 3501; 100.0% identity (100.0% similar) in 520 aa overlap (1-520:1-520) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 NQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 NQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 QETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_079 QETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEV 430 440 450 460 470 480 490 500 510 520 pF1KE3 YFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC :::::::::::::::::::::::::::::::::::::::: NP_079 YFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC 490 500 510 520 >>XP_006712830 (OMIM: 241080,612515) PREDICTED: DDB1- an (433 aa) initn: 2909 init1: 2909 opt: 2909 Z-score: 3575.3 bits: 670.9 E(85289): 2.1e-192 Smith-Waterman score: 2909; 100.0% identity (100.0% similar) in 433 aa overlap (88-520:1-433) 60 70 80 90 100 110 pF1KE3 PIAYERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDY :::::::::::::::::::::::::::::: XP_006 MPKCSKSEKIEDALLWECPVGDILPNSSDY 10 20 30 120 130 140 150 160 170 pF1KE3 KSSLIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KSSLIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVA 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE3 RQAGIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RQAGIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYS 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE3 FQTIAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 FQTIAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQI 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE3 GGHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GGHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIH 220 230 240 250 260 270 360 370 380 390 400 410 pF1KE3 VGPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VGPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDD 280 290 300 310 320 330 420 430 440 450 460 470 pF1KE3 DPEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DPEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYS 340 350 360 370 380 390 480 490 500 510 520 pF1KE3 HEVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC ::::::::::::::::::::::::::::::::::::::::::: XP_006 HEVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC 400 410 420 430 >>XP_006712831 (OMIM: 241080,612515) PREDICTED: DDB1- an (433 aa) initn: 2909 init1: 2909 opt: 2909 Z-score: 3575.3 bits: 670.9 E(85289): 2.1e-192 Smith-Waterman score: 2909; 100.0% identity (100.0% similar) in 433 aa overlap (88-520:1-433) 60 70 80 90 100 110 pF1KE3 PIAYERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDY :::::::::::::::::::::::::::::: XP_006 MPKCSKSEKIEDALLWECPVGDILPNSSDY 10 20 30 120 130 140 150 160 170 pF1KE3 KSSLIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KSSLIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVA 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE3 RQAGIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RQAGIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYS 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE3 FQTIAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 FQTIAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQI 160 170 180 190 200 210 300 310 320 330 340 350 pF1KE3 GGHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GGHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIH 220 230 240 250 260 270 360 370 380 390 400 410 pF1KE3 VGPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 VGPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDD 280 290 300 310 320 330 420 430 440 450 460 470 pF1KE3 DPEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 DPEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYS 340 350 360 370 380 390 480 490 500 510 520 pF1KE3 HEVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC ::::::::::::::::::::::::::::::::::::::::::: XP_006 HEVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC 400 410 420 430 >>XP_016860484 (OMIM: 241080,612515) PREDICTED: DDB1- an (385 aa) initn: 2480 init1: 2480 opt: 2480 Z-score: 3048.9 bits: 573.3 E(85289): 4.3e-163 Smith-Waterman score: 2480; 99.5% identity (99.7% similar) in 367 aa overlap (1-367:1-367) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 NQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPE ::::. : XP_016 NQVKLPKAEFTLTSVDRKQGGLRAT 370 380 >>XP_016860485 (OMIM: 241080,612515) PREDICTED: DDB1- an (372 aa) initn: 2233 init1: 2207 opt: 2216 Z-score: 2724.8 bits: 513.3 E(85289): 4.9e-145 Smith-Waterman score: 2216; 96.2% identity (97.7% similar) in 343 aa overlap (1-343:1-340) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP ::::::::::::::::::::::::::: .. :.: . :. XP_016 PWHYIVTPNKKKQKGVFHICALKDNSLWES---PMECVHIASEIAGGMCCWFCFSTACCS 310 320 330 340 350 370 380 390 400 410 420 pF1KE3 NQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPE XP_016 LPSRAEPDGTLVVTV 360 370 >>NP_001158293 (OMIM: 241080,612515) DDB1- and CUL4-asso (453 aa) initn: 2213 init1: 2213 opt: 2213 Z-score: 2719.8 bits: 512.7 E(85289): 9.4e-145 Smith-Waterman score: 2900; 87.1% identity (87.1% similar) in 520 aa overlap (1-520:1-453) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP ::::::::::::::::::::::::::: NP_001 PWHYIVTPNKKKQKGVFHICALKDNSL--------------------------------- 310 320 370 380 390 400 410 420 pF1KE3 NQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPE :::::::::::::::::::::::::: NP_001 ----------------------------------NENVLTVTASGRVVKKSFNLLDDDPE 330 340 350 430 440 450 460 470 480 pF1KE3 QETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEV 360 370 380 390 400 410 490 500 510 520 pF1KE3 YFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC :::::::::::::::::::::::::::::::::::::::: NP_001 YFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC 420 430 440 450 >>XP_016860486 (OMIM: 241080,612515) PREDICTED: DDB1- an (332 aa) initn: 2207 init1: 2207 opt: 2207 Z-score: 2714.5 bits: 511.3 E(85289): 1.8e-144 Smith-Waterman score: 2207; 99.7% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IAEQFMQQKLDLGCACRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGP :::::::::::::::::::::::::::. XP_016 PWHYIVTPNKKKQKGVFHICALKDNSLSFEAN 310 320 330 >>XP_016860487 (OMIM: 241080,612515) PREDICTED: DDB1- an (294 aa) initn: 2004 init1: 2004 opt: 2004 Z-score: 2465.9 bits: 465.1 E(85289): 1.3e-130 Smith-Waterman score: 2004; 100.0% identity (100.0% similar) in 294 aa overlap (227-520:1-294) 200 210 220 230 240 250 pF1KE3 PFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQTIAEQFMQQKLDLGCAC :::::::::::::::::::::::::::::: XP_016 MYSSGLVRLYSFQTIAEQFMQQKLDLGCAC 10 20 30 260 270 280 290 300 310 pF1KE3 RWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGHPWHYIVTPNKKKQKGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGHPWHYIVTPNKKKQKGV 40 50 60 70 80 90 320 330 340 350 360 370 pF1KE3 FHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGPNQVKVLKLTEIENNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGPNQVKVLKLTEIENNSS 100 110 120 130 140 150 380 390 400 410 420 430 pF1KE3 QHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPEQETFKIVDYEDELDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPEQETFKIVDYEDELDLL 160 170 180 190 200 210 440 450 460 470 480 490 pF1KE3 SVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPNR 220 230 240 250 260 270 500 510 520 pF1KE3 VFSCYVYQMICDTGEEEETINRSC :::::::::::::::::::::::: XP_016 VFSCYVYQMICDTGEEEETINRSC 280 290 >>XP_016860491 (OMIM: 241080,612515) PREDICTED: DDB1- an (273 aa) initn: 1732 init1: 1635 opt: 1635 Z-score: 2013.0 bits: 381.2 E(85289): 2.2e-105 Smith-Waterman score: 1700; 89.5% identity (91.5% similar) in 294 aa overlap (227-520:1-273) 200 210 220 230 240 250 pF1KE3 PFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQTIAEQFMQQKLDLGCAC ::::::::::::::::: :: : XP_016 MYSSGLVRLYSFQTIAE----QKED----- 10 20 260 270 280 290 300 310 pF1KE3 RWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIGGHPWHYIVTPNKKKQKGV : . . :.. .:.:::::::::::::::::::::::::::::::::::: XP_016 -W------IWDQNFSL-----LTNMPPLLFEVSSLENAFQIGGHPWHYIVTPNKKKQKGV 30 40 50 60 320 330 340 350 360 370 pF1KE3 FHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGPNQVKVLKLTEIENNSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHVGPNQVKVLKLTEIENNSS 70 80 90 100 110 120 380 390 400 410 420 430 pF1KE3 QHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPEQETFKIVDYEDELDLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDDPEQETFKIVDYEDELDLL 130 140 150 160 170 180 440 450 460 470 480 490 pF1KE3 SVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPNR 190 200 210 220 230 240 500 510 520 pF1KE3 VFSCYVYQMICDTGEEEETINRSC :::::::::::::::::::::::: XP_016 VFSCYVYQMICDTGEEEETINRSC 250 260 270 >>XP_011510183 (OMIM: 241080,612515) PREDICTED: DDB1- an (509 aa) initn: 3231 init1: 1637 opt: 1637 Z-score: 2011.2 bits: 381.7 E(85289): 2.8e-105 Smith-Waterman score: 3198; 93.7% identity (94.4% similar) in 522 aa overlap (1-520:1-509) 10 20 30 40 50 60 pF1KE3 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MGPTRKPNVCSRLSRRALGCFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSRSPIA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YERGRIYFDNYRRCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGDILPNSSDYKSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LIALTAHNWLLRISATTGKILEKIYLAPYCKFRYLSWDTPQEVIAVKSAQNRGSAVARQA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GIQQHVLLYLAVFRVLPFSLVGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQT 190 200 210 220 230 240 250 260 270 280 290 pF1KE3 IAEQFMQQKLDLGCA--CRWGGTTGTVGEAPFGIPCNIKITDMPPLLFEVSSLENAFQIG :::: . : . . : : .: ::::::::::::::::::: XP_011 IAEQKEDWIWDQNFSLLTSKGDTLLLIG-------------DMPPLLFEVSSLENAFQIG 250 260 270 280 300 310 320 330 340 350 pF1KE3 GHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GHPWHYIVTPNKKKQKGVFHICALKDNSLAKNGIQEMDCCSLESDWIYFHPDASGRIIHV 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE3 GPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GPNQVKVLKLTEIENNSSQHQISEDFVILANRENHKNENVLTVTASGRVVKKSFNLLDDD 350 360 370 380 390 400 420 430 440 450 460 470 pF1KE3 PEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PEQETFKIVDYEDELDLLSVVAVTQIDAEGKAHLDFHCNEYGTLLKSIPLVESWDVTYSH 410 420 430 440 450 460 480 490 500 510 520 pF1KE3 EVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC :::::::::::::::::::::::::::::::::::::::::: XP_011 EVYFDRDLVLHIEQKPNRVFSCYVYQMICDTGEEEETINRSC 470 480 490 500 520 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:37:11 2016 done: Sat Nov 5 23:37:12 2016 Total Scan time: 7.290 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]