FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6670, 296 aa 1>>>pF1KE6670 296 - 296 aa - 296 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5150+/-0.000801; mu= 14.3378+/- 0.048 mean_var=66.6688+/-13.334, 0's: 0 Z-trim(107.3): 15 B-trim: 0 in 0/51 Lambda= 0.157077 statistics sampled from 9511 (9514) to 9511 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.292), width: 16 Scan time: 1.690 The best scores are: opt bits E(32554) CCDS2189.1 MMADHC gene_id:27249|Hs108|chr2 ( 296) 2010 464.2 5.4e-131 >>CCDS2189.1 MMADHC gene_id:27249|Hs108|chr2 (296 aa) initn: 2010 init1: 2010 opt: 2010 Z-score: 2465.3 bits: 464.2 E(32554): 5.4e-131 Smith-Waterman score: 2010; 100.0% identity (100.0% similar) in 296 aa overlap (1-296:1-296) 10 20 30 40 50 60 pF1KE6 MANVLCNRARLVSYLPGFCSLVKRVVNPKAFSTAGSSGSDESHVAAAPPDICSRTVWPDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 MANVLCNRARLVSYLPGFCSLVKRVVNPKAFSTAGSSGSDESHVAAAPPDICSRTVWPDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TMGPFGPQDQRFQLPGNIGFDCHLNGTASQKKSLVHKTLPDVLAEPLSSERHEFVMAQYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 TMGPFGPQDQRFQLPGNIGFDCHLNGTASQKKSLVHKTLPDVLAEPLSSERHEFVMAQYV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 NEFQGNDAPVEQEINSAETYFESARVECAIQTCPELLRKDFESLFPEVANGKLMILTVTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 NEFQGNDAPVEQEINSAETYFESARVECAIQTCPELLRKDFESLFPEVANGKLMILTVTQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KTKNDMTVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 KTKNDMTVWSEEVEIEREVLLEKFINGAKEICYALRAEGYWADFIDPSSGLAFFGPYTNN 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 TLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIMKKLSGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 TLFETDERYRHLGFSVDDLGCCKVIRHSLWGTHVVVGSIFTNATPDSHIMKKLSGN 250 260 270 280 290 296 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:17:00 2016 done: Tue Nov 8 15:17:00 2016 Total Scan time: 1.690 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]