FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6672, 307 aa 1>>>pF1KE6672 307 - 307 aa - 307 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6183+/-0.000924; mu= 13.1236+/- 0.055 mean_var=56.8323+/-11.573, 0's: 0 Z-trim(104.4): 23 B-trim: 452 in 1/49 Lambda= 0.170128 statistics sampled from 7882 (7884) to 7882 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.242), width: 16 Scan time: 2.180 The best scores are: opt bits E(32554) CCDS33299.1 KYNU gene_id:8942|Hs108|chr2 ( 307) 2062 514.4 4.4e-146 CCDS2183.1 KYNU gene_id:8942|Hs108|chr2 ( 465) 2022 504.6 5.9e-143 >>CCDS33299.1 KYNU gene_id:8942|Hs108|chr2 (307 aa) initn: 2062 init1: 2062 opt: 2062 Z-score: 2736.2 bits: 514.4 E(32554): 4.4e-146 Smith-Waterman score: 2062; 100.0% identity (100.0% similar) in 307 aa overlap (1-307:1-307) 10 20 30 40 50 60 pF1KE6 MEPSSLELPADTVQRIAAELKCHPTDERVALHLDEEDKLRHFRECFYIPKIQDLPPVDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MEPSSLELPADTVQRIAAELKCHPTDERVALHLDEEDKLRHFRECFYIPKIQDLPPVDLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 KDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 QAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 QAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP 250 260 270 280 290 300 pF1KE6 ARSEFFN ::::::: CCDS33 ARSEFFN >>CCDS2183.1 KYNU gene_id:8942|Hs108|chr2 (465 aa) initn: 2021 init1: 2021 opt: 2022 Z-score: 2680.0 bits: 504.6 E(32554): 5.9e-143 Smith-Waterman score: 2022; 98.7% identity (99.0% similar) in 306 aa overlap (1-306:1-306) 10 20 30 40 50 60 pF1KE6 MEPSSLELPADTVQRIAAELKCHPTDERVALHLDEEDKLRHFRECFYIPKIQDLPPVDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 MEPSSLELPADTVQRIAAELKCHPTDERVALHLDEEDKLRHFRECFYIPKIQDLPPVDLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 LVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 KDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 KDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 LNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 QAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 QAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKP 250 260 270 280 290 300 pF1KE6 ARSEFFN : .: CCDS21 ALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKK 310 320 330 340 350 360 307 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:18:13 2016 done: Tue Nov 8 15:18:14 2016 Total Scan time: 2.180 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]