FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9404, 347 aa 1>>>pF1KE9404 347 - 347 aa - 347 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3165+/-0.000856; mu= 15.9006+/- 0.051 mean_var=103.2122+/-31.483, 0's: 0 Z-trim(107.2): 159 B-trim: 1146 in 2/47 Lambda= 0.126243 statistics sampled from 9133 (9424) to 9133 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.652), E-opt: 0.2 (0.289), width: 16 Scan time: 2.610 The best scores are: opt bits E(32554) CCDS2163.1 GPR148 gene_id:344561|Hs108|chr2 ( 347) 2304 430.6 9.5e-121 >>CCDS2163.1 GPR148 gene_id:344561|Hs108|chr2 (347 aa) initn: 2304 init1: 2304 opt: 2304 Z-score: 2281.3 bits: 430.6 E(32554): 9.5e-121 Smith-Waterman score: 2304; 99.7% identity (99.7% similar) in 347 aa overlap (1-347:1-347) 10 20 30 40 50 60 pF1KE9 MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 AATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSLGGWELGRMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 AATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSLGGWELGRMA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 CGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 CGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 TFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 TFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 RIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS21 RIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWL 250 260 270 280 290 300 310 320 330 340 pF1KE9 LAANSEVLMMLPRAMLPYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS :::::::::::::::: :::::::::::::::::::::::::::::: CCDS21 LAANSEVLMMLPRAMLTYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS 310 320 330 340 347 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:15:36 2016 done: Sun Nov 6 18:15:36 2016 Total Scan time: 2.610 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]