FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9861, 408 aa 1>>>pF1KB9861 408 - 408 aa - 408 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.5665+/-0.000354; mu= -0.7496+/- 0.022 mean_var=259.2639+/-55.862, 0's: 0 Z-trim(123.9): 134 B-trim: 2163 in 2/57 Lambda= 0.079653 statistics sampled from 44302 (44452) to 44302 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.823), E-opt: 0.2 (0.521), width: 16 Scan time: 10.230 The best scores are: opt bits E(85289) NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408) 2847 339.8 7.5e-93 NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416) 1992 241.5 2.9e-63 NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417) 1987 240.9 4.3e-63 NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439) 1935 235.0 2.8e-61 NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495) 795 104.0 8.4e-22 NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465) 754 99.3 2.1e-20 NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478) 700 93.1 1.6e-18 NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319) 635 85.5 2.1e-16 NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373) 607 82.3 2.2e-15 NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345) 569 77.9 4.2e-14 NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553) 570 78.2 5.5e-14 NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501) 558 76.8 1.3e-13 NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330) 552 76.0 1.6e-13 NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376) 530 73.5 1e-12 NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457) 512 71.5 4.9e-12 NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463) 512 71.5 4.9e-12 NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350) 501 70.1 9.5e-12 NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 500 70.1 1.2e-11 NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379) 496 69.6 1.5e-11 NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 479 67.6 6.3e-11 XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte ( 439) 470 66.6 1.3e-10 NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472) 470 66.7 1.4e-10 NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 466 66.1 1.6e-10 NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403) 445 63.7 9.2e-10 NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489) 430 62.1 3.5e-09 NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421) 416 60.4 9.6e-09 XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570) 400 58.7 4.3e-08 NP_001032242 (OMIM: 616302) forkhead box protein K ( 733) 400 58.8 5.2e-08 NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660) 381 56.5 2.2e-07 XP_006710521 (OMIM: 616035) PREDICTED: forkhead bo ( 607) 349 52.8 2.6e-06 XP_011539328 (OMIM: 616035) PREDICTED: forkhead bo ( 622) 349 52.8 2.7e-06 NP_001185779 (OMIM: 616035) forkhead box protein J ( 622) 349 52.8 2.7e-06 NP_055762 (OMIM: 616035) forkhead box protein J3 i ( 622) 349 52.8 2.7e-06 NP_001185780 (OMIM: 616035) forkhead box protein J ( 622) 349 52.8 2.7e-06 XP_005270689 (OMIM: 616035) PREDICTED: forkhead bo ( 630) 349 52.9 2.7e-06 XP_016856182 (OMIM: 616035) PREDICTED: forkhead bo ( 573) 347 52.6 2.9e-06 NP_001185781 (OMIM: 616035) forkhead box protein J ( 588) 347 52.6 3e-06 XP_006710522 (OMIM: 616035) PREDICTED: forkhead bo ( 596) 347 52.6 3e-06 XP_016880718 (OMIM: 600838,601705) PREDICTED: fork ( 567) 342 52.0 4.4e-06 XP_011523669 (OMIM: 600838,601705) PREDICTED: fork ( 462) 331 50.7 8.9e-06 XP_011523670 (OMIM: 600838,601705) PREDICTED: fork ( 436) 330 50.5 9.3e-06 XP_011523672 (OMIM: 600838,601705) PREDICTED: fork ( 436) 330 50.5 9.3e-06 XP_011523671 (OMIM: 600838,601705) PREDICTED: fork ( 436) 330 50.5 9.3e-06 XP_011523664 (OMIM: 600838,601705) PREDICTED: fork ( 648) 330 50.7 1.3e-05 XP_016880717 (OMIM: 600838,601705) PREDICTED: fork ( 648) 330 50.7 1.3e-05 NP_003584 (OMIM: 600838,601705) forkhead box prote ( 648) 330 50.7 1.3e-05 XP_005258103 (OMIM: 600838,601705) PREDICTED: fork ( 648) 330 50.7 1.3e-05 XP_011523661 (OMIM: 600838,601705) PREDICTED: fork ( 649) 330 50.7 1.3e-05 XP_011523660 (OMIM: 600838,601705) PREDICTED: fork ( 649) 330 50.7 1.3e-05 NP_005188 (OMIM: 602628) forkhead box protein N3 i ( 468) 314 48.7 3.5e-05 >>NP_036316 (OMIM: 611084) forkhead box protein D4-like (408 aa) initn: 2847 init1: 2847 opt: 2847 Z-score: 1788.0 bits: 339.8 E(85289): 7.5e-93 Smith-Waterman score: 2847; 100.0% identity (100.0% similar) in 408 aa overlap (1-408:1-408) 10 20 30 40 50 60 pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 VARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 VARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 LQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTY 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 WSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 WSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 LPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 SLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 SLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSS 310 320 330 340 350 360 370 380 390 400 pF1KB9 LSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL :::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL 370 380 390 400 >>NP_954714 (OMIM: 611085) forkhead box protein D4-like (416 aa) initn: 2051 init1: 1512 opt: 1992 Z-score: 1256.9 bits: 241.5 E(85289): 2.9e-63 Smith-Waterman score: 1992; 94.1% identity (97.0% similar) in 303 aa overlap (1-302:1-303) 10 20 30 40 50 60 pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ :::::::::::::::::::::::::::::::::::::::::::::: :.::::::::::: NP_954 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA :::::::::::::::::: :::::::::.::::::::::::::::::::::::::::::: NP_954 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::. NP_954 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_954 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ : ::::::::::::::::::::::::: ::::::: .::::::::::::::::. .: . NP_954 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS : : NP_954 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ 310 320 330 340 350 360 >>NP_954586 (OMIM: 611086) forkhead box protein D4-like (417 aa) initn: 2044 init1: 1522 opt: 1987 Z-score: 1253.7 bits: 240.9 E(85289): 4.3e-63 Smith-Waterman score: 1987; 94.1% identity (96.7% similar) in 303 aa overlap (1-302:1-303) 10 20 30 40 50 60 pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ :::::::: ::::::::::::::::::::::::::::::::::: :::.::::::::::: NP_954 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ 10 20 30 40 50 60 70 80 90 100 110 pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA :::::::::::::::::: :::::::::.::::::::::::::::::::::::::::::: NP_954 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::. NP_954 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ : ::::::::::::::::::::::::: ::::::::.::::::::::: ::::. .: . NP_954 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS : : NP_954 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ 310 320 330 340 350 360 >>NP_997188 (OMIM: 601092) forkhead box protein D4 [Homo (439 aa) initn: 1819 init1: 1513 opt: 1935 Z-score: 1221.1 bits: 235.0 E(85289): 2.8e-61 Smith-Waterman score: 1935; 92.4% identity (95.0% similar) in 303 aa overlap (1-302:1-299) 10 20 30 40 50 60 pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ :::::::: :::::::::::::::::::::::::::: ::: :::.::::::::::: NP_997 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDED----EEEAASQQFLEQSLQPGLQ 10 20 30 40 50 70 80 90 100 110 pF1KB9 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA :::::::::::::::::: ::::::::::::::::::::::::::::::: ::::::::: NP_997 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA 60 70 80 90 100 110 120 130 140 150 160 170 pF1KB9 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT ::::::::::::::::::: ::::::::::::::::::::::::::::::::::.::::. NP_997 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN 120 130 140 150 160 170 180 190 200 210 220 230 pF1KB9 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP ::::::::::::::::::::::::.::: ::::::::::::::::::::::::::::::: NP_997 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB9 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ : :::::::::::.:::::::::::::::::::::::::::::::::::::::. .: . NP_997 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS 240 250 260 270 280 290 300 310 320 330 340 350 pF1KB9 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS : : NP_997 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ 300 310 320 330 340 350 >>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo (495 aa) initn: 798 init1: 692 opt: 795 Z-score: 512.4 bits: 104.0 E(85289): 8.4e-22 Smith-Waterman score: 817; 41.4% identity (57.7% similar) in 449 aa overlap (3-406:39-448) 10 20 pF1KB9 MNLPRAERPRSTPQRSL---RDSDGEDGKIDV :: ::. :. : .. .:... :. NP_004 EIMSSESSPAALSEADADIDVVGGGSGGGELPARSGPRA-PRDVLPHGHEPPAEEAEADL 10 20 30 40 50 60 30 40 50 60 70 80 pF1KB9 LGEEEDEDEVEDEEEEA--SQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGT .::. : : .: :. . .:: .: :.: : :: NP_004 AEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGP-------GP-------- 70 80 90 100 110 90 100 110 120 130 140 pF1KB9 EFRAPPRSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRR .:: ..::. :.: .::::::::::::::::::.:::::: :: ::::::::::. NP_004 ---GPPSGGAAT---RSPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYRE 120 130 140 150 160 150 160 170 180 190 200 pF1KB9 KFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRH :::::::::::::::::::::::::::.::::.::.::: : :::::::::::::::::. NP_004 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQ 170 180 190 200 210 220 210 220 230 240 250 pF1KB9 QLTPGAHLPHPFP---LPAAHAALHNPR---PG-PLLGAPA----LPQPVPGAYPNTAPG : : ::: : : .. :: .: :: :: . : :. :: : :: NP_004 PLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPP---PG 230 240 250 260 270 280 260 270 280 290 300 pF1KB9 RRPYALLHPHPPRYLLLSA-----------PAYAGAPKKAE--GADLATPGTLPVLQPSL :. :::: . . .: :. :.:: . .. .: :. :. :. NP_004 PAPHP--HPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPAS 290 300 310 320 330 340 310 320 330 340 350 pF1KB9 GPQPWEEGKGLASPPGG--GCI-SFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS : : :: . :. :: .: :. . :...: ::: ::.. NP_004 GSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGL-----PTA-----LLRQ-- 350 360 370 380 360 370 380 390 400 pF1KB9 SLSDNFAATAAASGGGLRQR-------LRSHQGRGA-----GRAPVGRVGAAAVSGGGRG .:. . .. :...:.: :: . .: : :: :.. : :::.. ::. NP_004 GLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQA 390 400 410 420 430 440 pF1KB9 L NP_004 QVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF 450 460 470 480 490 >>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo (465 aa) initn: 753 init1: 654 opt: 754 Z-score: 487.3 bits: 99.3 E(85289): 2.1e-20 Smith-Waterman score: 801; 42.9% identity (59.7% similar) in 427 aa overlap (4-402:44-436) 10 20 30 pF1KB9 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEE :: : . .: :. ::: ... : :: NP_004 AEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQR-RRRRRSYAGED-ELEDLEEE 20 30 40 50 60 70 40 50 60 70 80 90 pF1KB9 EDEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPP ::.:.. .. . :: : .:. ::: . . : NP_004 EDDDDILLAPPAGG-----SPAPPGPAPAAGAGA--------GGGGGGGGAGG------- 80 90 100 110 100 110 120 130 140 150 pF1KB9 RSAAASEDARQP-AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQ ...:. :..: .::::::::::::::::::.:::::: :: ::::::::::.:::::: NP_004 -GGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQ 120 130 140 150 160 170 160 170 180 190 200 210 pF1KB9 NSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP-G :::::::::::::::::::::.::::.::.::: : :::::::::::::::::. : : . NP_004 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPN 180 190 200 210 220 230 220 230 240 250 260 pF1KB9 AHLPHPFPLPAAHAA--LHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYAL-LHPH-PP : . . : .: :: .: . : :: : : : :: . .: :.: : :. :: NP_004 AAAAESLLLRGAGAAGGAGDPAAAAALFPPA-PPPPPHAY-GYGPYGCGYGLQLPPYAPP 240 250 260 270 280 270 280 290 300 pF1KB9 RYLLLSAPAYAGA------------PKKAEGADLAT------PGTLPVLQPSLGPQPWEE :. .: : :.: : .. .:.:: : : . : :: : NP_004 SALFAAAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALP--GPLPASA 290 300 310 320 330 340 310 320 330 340 350 360 pF1KB9 GKGLASPPGGGCIS---FSIESIMQGVRG-AGTGAAQSLSPTAWSYCPLLQRPSSLSDNF .: :. ::.. .. ::::::. : : :...:: . . .: . : :: .. NP_004 AK--AGGPGASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASP---SPSPVAAPP 350 360 370 380 390 400 370 380 390 400 pF1KB9 AATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGGRGL : ..:::: . . . :. :. ..::: : NP_004 AP--GSSGGGCAAQAAVGPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFT 410 420 430 440 450 NP_004 ARISNC 460 >>NP_036315 (OMIM: 607836,611539) forkhead box protein D (478 aa) initn: 787 init1: 660 opt: 700 Z-score: 453.6 bits: 93.1 E(85289): 1.6e-18 Smith-Waterman score: 750; 45.5% identity (61.7% similar) in 347 aa overlap (65-405:106-410) 40 50 60 70 80 90 pF1KB9 DEDEVEDEEEEASQKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPR :::. . ::::. : :. : NP_036 QQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGS--GSAGGLAP- 80 90 100 110 120 130 100 110 120 130 140 150 pF1KB9 SAAASEDARQPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNS :. . .::::::::::::::::::.:.::::::: :::.::::::.:::::::: NP_036 ----SKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNS 140 150 160 170 180 160 170 180 190 200 210 pF1KB9 IRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHL :::::::::::::::::::.::::.::.::: :.::::::::::::::::::: :: NP_036 IRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQ---EHL 190 200 210 220 230 240 220 230 240 250 260 270 pF1KB9 PHPFPLPAAHAALHNPRPGPLLGAPALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSA ..:: .:: .: . .: .: :::.: :: : NP_036 -------REQTALMMQS----FGAYSLAAAAGAA----GPYGRPYGL-HPAAAAGAY-SH 250 260 270 280 280 290 300 310 320 pF1KB9 PAYAGAPKKAEGADL--ATPGTLPVLQPSLGPQP-WEEGKGLA---SPPGGGCISFSIES :: :.: : . . : : . ::: :.. : : :. : : : : ......: NP_036 PAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPG-LQLQLNS 290 300 310 320 330 340 330 340 350 360 370 380 pF1KB9 IMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGA . .. .:::..: . . . . : ::: .:. . . :. :: .. :: NP_036 LGAAAAAAGTAGAAGTTASLIKSEPS-ARPSFSIENIIGGGPAAPGG--------SAVGA 350 360 370 380 390 390 400 pF1KB9 GRAPVGRVGAAAVSGGGRGL : : :... :::: NP_036 GVA-----GGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLS 400 410 420 430 440 450 >>NP_036318 (OMIM: 107250,601094,610256) forkhead box pr (319 aa) initn: 626 init1: 547 opt: 635 Z-score: 415.7 bits: 85.5 E(85289): 2.1e-16 Smith-Waterman score: 653; 45.0% identity (61.5% similar) in 278 aa overlap (57-316:17-292) 30 40 50 60 70 80 pF1KB9 IDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ-VARWGGVALPREHIEGGGPSDPSEF :.: :: : : : : . . NP_036 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA 10 20 30 40 90 100 110 120 130 140 pF1KB9 GTEFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFP : :: . . .. :.: .::::::::::.::. ..: .::::..: ::. :: NP_036 GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFA 50 60 70 80 90 100 150 160 170 180 190 200 pF1KB9 YYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKR .:: . :::::::::.:::::::.:::::.::::.::.::::. :::::::::::::: NP_036 FYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKR 110 120 130 140 150 160 210 220 230 240 250 pF1KB9 FKRHQLTP-GAHLPHPFPLPAAHAALHNPRPGPLLGAP---ALPQPVPGAY---PNTAPG ::: .: .: : : ::: .: . : ::: : .: : : : : : .. . NP_036 FKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVPPPSAGPGPSPPARLFSVDSLVN 170 180 190 200 210 220 260 270 280 290 300 pF1KB9 RRPY--ALLHPHPPRYLLLSAPAYAGAPKKAEGAD---LATPG--TLPVLQPSLGPQPWE .: .: :.:: .: : : : : .. .: .::. .:. :: : : NP_036 LQPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGPGPLPAE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KB9 EGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPSSLSDNFAAT .::.: NP_036 PLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL 290 300 310 >>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr (373 aa) initn: 574 init1: 538 opt: 607 Z-score: 397.3 bits: 82.3 E(85289): 2.2e-15 Smith-Waterman score: 667; 40.6% identity (58.5% similar) in 342 aa overlap (86-400:30-350) 60 70 80 90 100 110 pF1KB9 QPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDAR--QPAKPPYSYI :. .: :.:.. . : : .::::::: NP_004 MTAESGPPPPQPEVLATVKEERGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYI 10 20 30 40 50 120 130 140 150 160 170 pF1KB9 ALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPG :::.::: ..:..::::.:: ::. :::.:: . :::::::::.:::::.::::: : NP_004 ALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAG 60 70 80 90 100 110 180 190 200 210 220 230 pF1KB9 HPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPG .::::.::.::: ..:::..:::::::::::: .:. : :: :: . NP_004 RPGKGNYWALDPNAEDMFESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAAAAAAAAA 120 130 140 150 160 170 240 250 260 270 280 290 pF1KB9 PLLGA-PALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATP . :: :: : ::: . : : .: : :: : :: . .: .. : : NP_004 IFPGAVPAARPPYPGA---VYAGYAPPSLAAP-PPVYY----PAASPGPCRVFGLVPERP 180 190 200 210 220 230 300 310 320 330 340 350 pF1KB9 GTLPVLQPSLGPQPWEEGKGLASPPGGGCI--SFSIESIMQGVRGAGTGAAQSLSPTAWS :.: ::: : : :::.: : . . : . :: .:. .:.:.. NP_004 -----LSPELGPAP--------SGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYA 240 250 260 270 360 370 380 pF1KB9 YC---PLLQRPSSL-SDNFAAT----------AAASGGGLRQRL----RSHQGR----GA : :.. : :::. :..:.::.. . :. :. :: NP_004 AAYAGPDGAYPQGAGSAIFAAAGRLAGPASPPAGGSSGGVETTVDFYGRTSPGQFGALGA 280 290 300 310 320 330 390 400 pF1KB9 GRAPVGRVGAAAVSGGGRGL : :..:.:. NP_004 CYNPGGQLGGASAGAYHARHAAAYPGGIDRFVSAM 340 350 360 370 >>NP_005241 (OMIM: 603252) forkhead box protein L1 [Homo (345 aa) initn: 540 init1: 510 opt: 569 Z-score: 374.2 bits: 77.9 E(85289): 4.2e-14 Smith-Waterman score: 569; 40.5% identity (57.2% similar) in 306 aa overlap (78-368:22-311) 50 60 70 80 90 100 pF1KB9 QKFLEQSLQPGLQVARWGGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAK :: :. . : :: . ::: :. : : NP_005 MSHLFDPRLPALAASPMLYLYGPERPG-LPLAF-APAAALAASGRAETPQK 10 20 30 40 110 120 130 140 150 160 pF1KB9 PPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVK :::::::::.::: ..:..:.::.:: :: :::.:. . .::::::::::::::::: NP_005 PPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVK 50 60 70 80 90 100 170 180 190 200 210 220 pF1KB9 IPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGA-HLPHPFPLPAAHAA .::: :.::::.::.::: :::.::.. ::::: . . ::: . .: ..: NP_005 VPREKGRPGKGSYWTLDPRCLDMFENGNY-RRRKR--KPKPGPGAPEAKRPRAETHQRSA 110 120 130 140 150 160 230 240 250 260 270 280 pF1KB9 LHNPRPGPLLGA--PALP--QPVPGAYPNTAPGRRPYALLH-PHPPRYLLLSAPAYAGAP .:. : :. ::. : .:.. : : : :: : .. : :: NP_005 EAQPEAGSGAGGSGPAISRLQAAPAGPSPLLDGPSPPAPLHWPGTASPNEDAGDAAQGAA 170 180 190 200 210 220 290 300 310 320 330 pF1KB9 KKAEGADLAT---PGTLPVLQPSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGT : : : ::. : :.:. .: :. ::::.::. : .: NP_005 AVAVGQAARTGDGPGS-P-LRPASRSSPKSSDKSK---------SFSIDSILAGKQGQKP 230 240 250 260 270 340 350 360 370 380 390 pF1KB9 GAAQSL------SPTAWSYCPLLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGAGRAP ... : .: . :: ::: : :. NP_005 PSGDELLGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGFYQLGIPFLSYFPL 280 290 300 310 320 330 400 pF1KB9 VGRVGAAAVSGGGRGL NP_005 QVPDTVLHFQ 340 408 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:17:44 2016 done: Sun Nov 6 18:17:46 2016 Total Scan time: 10.230 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]