FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7578, 284 aa 1>>>pF1KB7578 284 - 284 aa - 284 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.5092+/-0.000337; mu= 4.1932+/- 0.021 mean_var=307.9603+/-62.857, 0's: 0 Z-trim(125.3): 174 B-trim: 828 in 1/57 Lambda= 0.073085 statistics sampled from 48488 (48723) to 48488 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.846), E-opt: 0.2 (0.571), width: 16 Scan time: 9.350 The best scores are: opt bits E(85289) NP_057254 (OMIM: 604240) T-cell leukemia homeobox ( 284) 1981 221.3 1.7e-57 XP_011538046 (OMIM: 186770) PREDICTED: T-cell leuk ( 342) 1080 126.4 7.4e-29 NP_066305 (OMIM: 604640) T-cell leukemia homeobox ( 291) 1016 119.6 7.1e-27 NP_005512 (OMIM: 186770) T-cell leukemia homeobox ( 330) 866 103.8 4.5e-22 XP_011538047 (OMIM: 186770) PREDICTED: T-cell leuk ( 269) 761 92.6 8.4e-19 NP_001182446 (OMIM: 186770) T-cell leukemia homeob ( 257) 547 70.1 5.1e-12 XP_005269800 (OMIM: 600647) PREDICTED: homeobox pr ( 273) 373 51.7 1.8e-06 NP_005510 (OMIM: 600647) homeobox protein HMX2 [Ho ( 273) 373 51.7 1.8e-06 NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 ( 367) 326 46.9 6.6e-05 NP_002720 (OMIM: 604420) hematopoietically-express ( 270) 322 46.4 7.3e-05 NP_002439 (OMIM: 106600,142983,189500,608874) home ( 303) 305 44.6 0.00027 NP_061815 (OMIM: 142992,612109) homeobox protein H ( 348) 303 44.5 0.00034 NP_064448 (OMIM: 605211) barH-like 1 homeobox prot ( 327) 302 44.3 0.00035 NP_004088 (OMIM: 600034) homeobox protein EMX1 [Ho ( 290) 298 43.9 0.00044 NP_004089 (OMIM: 269160,600035) homeobox protein E ( 252) 287 42.6 0.0009 NP_055436 (OMIM: 142981) homeobox protein Hox-D4 [ ( 255) 285 42.4 0.001 NP_001269359 (OMIM: 607164) transcription factor L ( 198) 280 41.8 0.0013 NP_003308 (OMIM: 118700,188550,600635,610978) home ( 371) 282 42.3 0.0016 NP_001073136 (OMIM: 118700,188550,600635,610978) h ( 401) 282 42.4 0.0017 NP_001099044 (OMIM: 613380) homeobox protein HMX3 ( 357) 280 42.1 0.0019 XP_005246568 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 XP_005246566 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 XP_005246570 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 XP_005246567 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 NP_008829 (OMIM: 142980) homeobox protein Hox-D3 [ ( 432) 277 41.9 0.0026 XP_011509367 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 XP_011509368 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 XP_006712540 (OMIM: 142980) PREDICTED: homeobox pr ( 432) 277 41.9 0.0026 NP_001180 (OMIM: 602183,613330) homeobox protein N ( 333) 269 40.9 0.004 NP_006553 (OMIM: 604255) transcription factor LBX1 ( 281) 267 40.6 0.0042 XP_016868632 (OMIM: 610772) PREDICTED: homeobox pr ( 265) 266 40.4 0.0043 NP_001009812 (OMIM: 607164) transcription factor L ( 194) 263 40.0 0.0044 NP_006158 (OMIM: 602041) homeobox protein Nkx-3.1 ( 234) 263 40.1 0.005 NP_064447 (OMIM: 605212) barH-like 2 homeobox prot ( 387) 267 40.8 0.0051 NP_001243268 (OMIM: 602041) homeobox protein Nkx-3 ( 159) 259 39.4 0.0052 NP_055175 (OMIM: 603245) homeobox protein Nkx-2.8 ( 239) 261 39.9 0.0058 NP_002132 (OMIM: 142953) homeobox protein Hox-A4 [ ( 320) 261 40.0 0.007 NP_573574 (OMIM: 616253) GS homeobox 2 [Homo sapie ( 304) 258 39.7 0.0084 >>NP_057254 (OMIM: 604240) T-cell leukemia homeobox prot (284 aa) initn: 1981 init1: 1981 opt: 1981 Z-score: 1153.4 bits: 221.3 E(85289): 1.7e-57 Smith-Waterman score: 1981; 100.0% identity (100.0% similar) in 284 aa overlap (1-284:1-284) 10 20 30 40 50 60 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MEPGMLGPHNLPHHEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 GPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 GPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPW 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP 190 200 210 220 230 240 250 260 270 280 pF1KB7 RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV :::::::::::::::::::::::::::::::::::::::::::: NP_057 RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV 250 260 270 280 >>XP_011538046 (OMIM: 186770) PREDICTED: T-cell leukemia (342 aa) initn: 1090 init1: 933 opt: 1080 Z-score: 639.1 bits: 126.4 E(85289): 7.4e-29 Smith-Waterman score: 1087; 58.1% identity (74.4% similar) in 313 aa overlap (4-282:32-339) 10 20 30 pF1KB7 MEPGMLGPHN-LPHHEPISFGIDQILSGPETPG : .:: . : : .:. ...: : : XP_011 EHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGE---YGLGCLVGGAYTYG 10 20 30 40 50 40 50 60 70 pF1KB7 GG---LGLGRGGQG-HGENGAFSGGYHGASGYGPAGSLAPLPGS--------SGVGPGG- :: . : :: : .: .: :: : .: : : :..:: :: .: :::: XP_011 GGGSAAATGAGGAGAYGTGGP--GGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGG 60 70 80 90 100 110 80 90 100 110 120 pF1KB7 --------------VIRVPAHRPLPV----PPP-AGGAPAVPGPSGLGGAGGLAGLTFPW :::::::::: : : : : :.::. .. :...:.:::::: XP_011 GGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPW 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK :.:.::..:::.:.:::::. :::::::::::::::.:::::::.: :. :::.:: ::: XP_011 MESNRRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQK 180 190 200 210 220 230 190 200 210 220 230 240 pF1KB7 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP ::::::::::::::.:::::::::::::::::::::::::::::..:.:.::.:::.:. XP_011 YLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQ 240 250 260 270 280 290 250 260 270 280 pF1KB7 RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLASVV . : ::: ::::.::::::::::::::..:. :..::...:: XP_011 KSLAQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASACE 300 310 320 330 340 >>NP_066305 (OMIM: 604640) T-cell leukemia homeobox prot (291 aa) initn: 1063 init1: 770 opt: 1016 Z-score: 603.4 bits: 119.6 E(85289): 7.1e-27 Smith-Waterman score: 1102; 64.1% identity (80.1% similar) in 287 aa overlap (12-280:10-290) 10 20 30 40 50 pF1KB7 MEPGMLGPHNLPH-HEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASG :: ::::::::::::..:. .. :: .: . :. :: ::. NP_066 MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPA--PRGPDGASYLGGPPGGRPGATY 10 20 30 40 50 60 70 80 90 100 pF1KB7 YG-PA---GSLAPLP--GSSGVG----PGGVIRVPAHRPLP--VPPPAGGA-PAVPG-PS . :: : ::. :: .:. :.:::::::::::: :::: .: ::.:. :. NP_066 PSLPASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPT 60 70 80 90 100 110 110 120 130 140 150 160 pF1KB7 GLGGAGGLAGLTFPWMDSGRRFAKDRLTAA--LSPFSGTRRIGHPYQNRTPPKRKKPRTS ...:.::.::::.:.:::.:::.::: :.::. :::::::::::::::::::::: NP_066 ----VSSLGGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTS 120 130 140 150 160 170 170 180 190 200 210 220 pF1KB7 FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAE ::: :. :::.:: :::::::::::::::.:.:::::::::::::::::::::::::::: NP_066 FSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAE 180 190 200 210 220 230 230 240 250 260 270 280 pF1KB7 RHRAGRLLLHLQQDALPRPLRPPLPPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLAS :..:.::.:.::.::. . : . :::::::::::::::::::: ::. :: .:..: NP_066 RQQASRLMLQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLV 240 250 260 270 280 290 pF1KB7 VV >>NP_005512 (OMIM: 186770) T-cell leukemia homeobox prot (330 aa) initn: 1021 init1: 715 opt: 866 Z-score: 517.3 bits: 103.8 E(85289): 4.5e-22 Smith-Waterman score: 1018; 55.2% identity (68.6% similar) in 328 aa overlap (13-282:13-327) 10 20 30 40 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSGPETPG----------GGLGLG--------RGGQ : :::::::::::..:. : : ::: :: NP_005 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 10 20 30 40 50 60 50 60 70 pF1KB7 GH------GENGAFSGGYHGASGYGPAG-----SLAPLPGS--------SGVGPGG---- : : ::.. : :. : :::: :..:: :: .: :::: NP_005 GSAAATGAGGAGAYGTGGPGGPG-GPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGS 70 80 90 100 110 80 90 100 110 120 pF1KB7 -----------VIRVPAHRPLPV----PPP-AGGAPAVPGPSGLGGAGGLAGLTFPWMDS :::::::::: : : : : :.::. .. :...:.:::::::.: NP_005 SGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMES 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 GRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLA .::..:::.: :::::::::::.:::::::.: :. :::.:: :::::: NP_005 NRRYTKDRFT------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLA 180 190 200 210 220 190 200 210 220 230 240 pF1KB7 SAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPL :::::::::::.:::::::::::::::::::::::::::::..:.:.::.:::.:. . : NP_005 SAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSL 230 240 250 260 270 280 250 260 270 280 pF1KB7 RPPLPPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLASVV ::: ::::.::::::::::::::..:. :..::...:: NP_005 AQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASACE 290 300 310 320 330 >>XP_011538047 (OMIM: 186770) PREDICTED: T-cell leukemia (269 aa) initn: 635 init1: 635 opt: 761 Z-score: 458.5 bits: 92.6 E(85289): 8.4e-19 Smith-Waterman score: 768; 55.0% identity (69.8% similar) in 242 aa overlap (4-213:32-269) 10 20 30 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSGPETPGG : .:: . . . .:. ...: : :: XP_011 EHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPAS--RLQDGEYGLGCLVGGAYTYGG 10 20 30 40 50 40 50 60 70 pF1KB7 G---LGLGRGGQG-HGENGAFSGGYHGASGYGPAGSLAPLPGS--------SGVGPGG-- : . : :: : .: .: :: : .: : : :..:: :: .: :::: XP_011 GGSAAATGAGGAGAYGTGGP--GGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGG 60 70 80 90 100 110 80 90 100 110 120 pF1KB7 -------------VIRVPAHRPLPV----PPP-AGGAPAVPGPSGLGGAGGLAGLTFPWM :::::::::: : : : : :.::. .. :...:.::::::: XP_011 GSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWM 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 DSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKY .:.::..:::.:.:::::. :::::::::::::::.:::::::.: :. :::.:: :::: XP_011 ESNRRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKY 180 190 200 210 220 230 190 200 210 220 230 240 pF1KB7 LASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPR :::::::::::::.:::::::::::::::::: XP_011 LASAERAALAKALKMTDAQVKTWFQNRRTKWR 240 250 260 250 260 270 280 pF1KB7 PLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV >>NP_001182446 (OMIM: 186770) T-cell leukemia homeobox p (257 aa) initn: 580 init1: 423 opt: 547 Z-score: 336.8 bits: 70.1 E(85289): 5.1e-12 Smith-Waterman score: 699; 51.9% identity (62.4% similar) in 258 aa overlap (13-213:13-257) 10 20 30 40 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSGPETPG----------GGLGLG--------RGGQ : :::::::::::..:. : : ::: :: NP_001 MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGG 10 20 30 40 50 60 50 60 70 pF1KB7 GH------GENGAFSGGYHGASGYGPAG-----SLAPLPGS--------SGVGPGG---- : : ::.. : :. : :::: :..:: :: .: :::: NP_001 GSAAATGAGGAGAYGTGGPGGPG-GPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGS 70 80 90 100 110 80 90 100 110 120 pF1KB7 -----------VIRVPAHRPLPV----PPP-AGGAPAVPGPSGLGGAGGLAGLTFPWMDS :::::::::: : : : : :.::. .. :...:.:::::::.: NP_001 SGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMES 120 130 140 150 160 170 130 140 150 160 170 180 pF1KB7 GRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLA .::..:::.: :::::::::::.:::::::.: :. :::.:: :::::: NP_001 NRRYTKDRFT------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLA 180 190 200 210 220 190 200 210 220 230 240 pF1KB7 SAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPL :::::::::::.:::::::::::::::::: NP_001 SAERAALAKALKMTDAQVKTWFQNRRTKWR 230 240 250 >>XP_005269800 (OMIM: 600647) PREDICTED: homeobox protei (273 aa) initn: 320 init1: 267 opt: 373 Z-score: 237.3 bits: 51.7 E(85289): 1.8e-06 Smith-Waterman score: 374; 36.5% identity (55.5% similar) in 263 aa overlap (18-262:19-262) 10 20 30 40 50 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSG-----PETPGGGLGLGRGGQGHGENGAFSGGY :: :..::.: :. : : . :. . .:. . :. XP_005 MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEEEEPDDGW 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB7 HGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLA .. . . : . : : : :.: :.: : :.: : :: .: ::: XP_005 KAPACF--------CPDQHGPKEQG----PKHHP-PIPFPCLGTPK--G-SGGSGPGGLE 70 80 90 100 120 130 140 150 160 170 pF1KB7 GLTF--PWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTP-PKRKKPRTSFSRSQVLE : : : . :.:: : :: :..: .: .:: :: :::::: . XP_005 RTPFLSP-SHSDFKEEKERLLPAGSPSPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQ 110 120 130 140 150 160 180 190 200 210 220 pF1KB7 LERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAER--HRAGR :: : ..::.:.::: ::..:..:..::::::::::.::.:: . : :: : ... XP_005 LESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQ 170 180 190 200 210 220 230 240 250 260 270 280 pF1KB7 LLLHLQ---QDALPRPLRPPLP-----PDPLCLHNSSLFALQNLQPWAEDNKVASVSGLA :. . .:. :: :.: : :: .:.: :: XP_005 TLVSMPLVFRDS--SLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY 230 240 250 260 270 pF1KB7 SVV >>NP_005510 (OMIM: 600647) homeobox protein HMX2 [Homo s (273 aa) initn: 320 init1: 267 opt: 373 Z-score: 237.3 bits: 51.7 E(85289): 1.8e-06 Smith-Waterman score: 374; 36.5% identity (55.5% similar) in 263 aa overlap (18-262:19-262) 10 20 30 40 50 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSG-----PETPGGGLGLGRGGQGHGENGAFSGGY :: :..::.: :. : : . :. . .:. . :. NP_005 MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEEEEPDDGW 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB7 HGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLA .. . . : . : : : :.: :.: : :.: : :: .: ::: NP_005 KAPACF--------CPDQHGPKEQG----PKHHP-PIPFPCLGTPK--G-SGGSGPGGLE 70 80 90 100 120 130 140 150 160 170 pF1KB7 GLTF--PWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTP-PKRKKPRTSFSRSQVLE : : : . :.:: : :: :..: .: .:: :: :::::: . NP_005 RTPFLSP-SHSDFKEEKERLLPAGSPSPGSERPRDGGAERQAGAAKKKTRTVFSRSQVYQ 110 120 130 140 150 160 180 190 200 210 220 pF1KB7 LERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAER--HRAGR :: : ..::.:.::: ::..:..:..::::::::::.::.:: . : :: : ... NP_005 LESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMAHASAQ 170 180 190 200 210 220 230 240 250 260 270 280 pF1KB7 LLLHLQ---QDALPRPLRPPLP-----PDPLCLHNSSLFALQNLQPWAEDNKVASVSGLA :. . .:. :: :.: : :: .:.: :: NP_005 TLVSMPLVFRDS--SLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY 230 240 250 260 270 pF1KB7 SVV >>NP_006159 (OMIM: 602563) homeobox protein Nkx-6.1 [Hom (367 aa) initn: 317 init1: 247 opt: 326 Z-score: 209.1 bits: 46.9 E(85289): 6.6e-05 Smith-Waterman score: 326; 32.8% identity (58.6% similar) in 256 aa overlap (8-245:87-332) 10 20 30 pF1KB7 MEPGMLGPHNLPHHEPISFGIDQILSGPETP-GGGLG :..: : ::..::: : : ..: . NP_006 SSSPSPPLGTHNPGGLKPPATGGLSSLGSPPQQLSAATP--HGINDILSRPSMPVASGAA 60 70 80 90 100 110 40 50 60 70 80 90 pF1KB7 LGRGG-QGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGP-GGVIRVPAHRPLPVPP- : .. .: . ... :.. .::. . :.. : .:: .: .:. : . : : :: NP_006 LPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPG 120 130 140 150 160 170 100 110 120 130 140 pF1KB7 ----PAGGAPAVPG--PSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGH :...: :. : :. :. : . . .: . .. . :: : .: .:. . . NP_006 LYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRDARL--ACTPHQGSILLDK 180 190 200 210 220 230 150 160 170 180 190 200 pF1KB7 PYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQN :::. : .:: .:.. ::. : . ::::. ::: :: .: ::..:::.:::: NP_006 D------GKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQN 240 250 260 270 280 210 220 230 240 250 pF1KB7 RRTKWRRQTAEE-------REAERHR-AGRLLLHLQQDALPRPLRPPLPPDPLCLHNSSL ::::::.. : : ...: .: : . ..: .:: : NP_006 RRTKWRKKHAAEMATAKKKQDSETERLKGASENEEEDDDYNKPLDPNSDDEKITQLLKKH 290 300 310 320 330 340 260 270 280 pF1KB7 FALQNLQPWAEDNKVASVSGLASVV NP_006 KSSSGGGGGLLLHASEPESSS 350 360 >>NP_002720 (OMIM: 604420) hematopoietically-expressed h (270 aa) initn: 301 init1: 238 opt: 322 Z-score: 208.3 bits: 46.4 E(85289): 7.3e-05 Smith-Waterman score: 322; 36.3% identity (62.6% similar) in 171 aa overlap (56-224:41-204) 30 40 50 60 70 80 pF1KB7 SGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPA : .. :: .: : :.:: .. . :.:. NP_002 GAVGVPLYAPTPLLQPAHPTPFYIEDILGRGPAAPTPAPTL-PSPNSSFTSLVSPYRTPV 20 30 40 50 60 90 100 110 120 130 140 pF1KB7 HRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAAL--SPFSGTR ..: :. : . :. .. : ::..: .:. : ..: : : .:. : NP_002 YEPTPIHPAFSHHSAAALAAAYG-PGGFGGPLYPFP----RTVNDYTHALLRHDPL-GKP 70 80 90 100 110 120 150 160 170 180 190 200 pF1KB7 RIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKT . :. .: ::: .. :: .:..:::..: ::::. :: ::: :.... :::: NP_002 LLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKT 130 140 150 160 170 180 210 220 230 240 250 260 pF1KB7 WFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPLPPDPLCLHNSSLFALQ ::::::.:::: :. .... NP_002 WFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQRQDLPSEQNKGASLDSSQCSPSPASQ 190 200 210 220 230 240 284 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:25:16 2016 done: Sun Nov 6 18:25:18 2016 Total Scan time: 9.350 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]