FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6385, 340 aa 1>>>pF1KE6385 340 - 340 aa - 340 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4603+/-0.000862; mu= 15.6842+/- 0.052 mean_var=66.0996+/-13.343, 0's: 0 Z-trim(106.3): 17 B-trim: 0 in 0/51 Lambda= 0.157752 statistics sampled from 8894 (8901) to 8894 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.273), width: 16 Scan time: 2.190 The best scores are: opt bits E(32554) CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 ( 340) 2185 506.0 1.8e-143 CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 ( 253) 1368 320.0 1.3e-87 CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 ( 322) 783 186.9 1.9e-47 CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 ( 325) 776 185.3 5.9e-47 CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 ( 322) 761 181.9 6.3e-46 CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 ( 337) 414 102.9 3.9e-22 >>CCDS1922.1 SFXN5 gene_id:94097|Hs108|chr2 (340 aa) initn: 2185 init1: 2185 opt: 2185 Z-score: 2689.2 bits: 506.0 E(32554): 1.8e-143 Smith-Waterman score: 2185; 100.0% identity (100.0% similar) in 340 aa overlap (1-340:1-340) 10 20 30 40 50 60 pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS19 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS19 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS19 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS19 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS19 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG 250 260 270 280 290 300 310 320 330 340 pF1KE6 LALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL :::::::::::::::::::::::::::::::::::::::: CCDS19 LALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL 310 320 330 340 >>CCDS82469.1 SFXN5 gene_id:94097|Hs108|chr2 (253 aa) initn: 1368 init1: 1368 opt: 1368 Z-score: 1686.3 bits: 320.0 E(32554): 1.3e-87 Smith-Waterman score: 1368; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208) 10 20 30 40 50 60 pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS :::::::::::::::::::::::::::: CCDS82 LNVLVQKANKFTPATRLLIQRFVPFPAVGRLSCRHAPGCSSLCKASCAWQPSAWPCRWPS 190 200 210 220 230 240 >>CCDS4394.1 SFXN1 gene_id:94081|Hs108|chr5 (322 aa) initn: 818 init1: 439 opt: 783 Z-score: 965.1 bits: 186.9 E(32554): 1.9e-47 Smith-Waterman score: 785; 39.1% identity (71.5% similar) in 330 aa overlap (19-340:2-322) 10 20 30 40 50 pF1KE6 MADTATTASAAAASAASASSDAPP-FQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERR :.. :: ... .::..:..: :: ::. . :::....:... CCDS43 MSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQ 10 20 30 40 60 70 80 90 100 110 pF1KE6 LREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPI :. : ....::..: . ::.:...:: :. : .. .::::.::... :::. .:.. : CCDS43 LESARKIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTI 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE6 VVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV . .. .: ...::::.::: :: :::.::.. : .... .:..:. .::. :. CCDS43 TGCMMTFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATAL 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 GLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVG :::.:.... .: :: ::::: :::.:: :. ::: ::. :: : : .:: .: CCDS43 GLNALTKHV---SP----LIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLG 170 180 190 200 210 240 250 260 270 280 290 pF1KE6 SSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAF : ::..:. .....:... : ...::..:. ::: :.:. : . :.: : :..: CCDS43 ESANAAKQAITQVVVSRILMAAPGMAIPPFIMNTLEKKAFLKRFPWMSAPIQ--VGLVGF 220 230 240 250 260 270 300 310 320 330 340 pF1KE6 GL--ALPLAISLFPQMSEIETSQLEPEI-AQATSS----RTVVYNKGL : : :: .:::: : . ...:: :. :. : : : .:::: CCDS43 CLVFATPLCCALFPQKSSMSVTSLEAELQAKIQESHPELRRVYFNKGL 280 290 300 310 320 >>CCDS7508.2 SFXN3 gene_id:81855|Hs108|chr10 (325 aa) initn: 802 init1: 431 opt: 776 Z-score: 956.4 bits: 185.3 E(32554): 5.9e-47 Smith-Waterman score: 778; 39.8% identity (69.3% similar) in 319 aa overlap (29-340:16-325) 10 20 30 40 50 60 pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL .::..:..: :: :::. . :::.:... .: CCDS75 MESKMGELPLDINIQEPRWDQSTFLGRARHFFTVTDPRNLLLSGAQL 10 20 30 40 70 80 90 100 110 120 pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV . . .....:. :.. ::.:..::: :. . .. .::::.::. . :::. .:.. :. CCDS75 EASRNIVQNYRAGVVTPGITEDQLWRAKYVYDSAFHPDTGEKVVLIGRMSAQVPMNMTIT 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE6 VGLLLPNQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAVG .: . ..:::::.::: :: :::.::.. : . .. .:..:. .::. :.: CCDS75 GCMLTFYRKTPTVVFWQWVNQSFNAIVNYSNRSGDTPITVRQLGTAYVSATTGAVATALG 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE6 LNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVGS :. : .: : :. ::::: :::.:: :. ::: ::. :: : : :. .: CCDS75 LKSL----TKHLPP---LVGRFVPFAAVAAANCINIPLMRQRELQVGIPVADEAGQRLGY 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE6 SKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLVCLAAFG : ::..........:. . .: ...::..:. ::: .:. :: : :.: : :..: CCDS75 SVTAAKQGIFQVVISRICMAIPAMAIPPLIMDTLEKKDFLKRRPWLGAPLQ--VGLVGFC 230 240 250 260 270 310 320 330 340 pF1KE6 L--ALPLAISLFPQMSEIETSQLEPEI-----AQATSSRTVVYNKGL : : :: .:::: : :. :.::::. : : ..: ::::: CCDS75 LVFATPLCCALFPQKSSIHISNLEPELRAQIHEQNPSVEVVYYNKGL 280 290 300 310 320 >>CCDS7539.1 SFXN2 gene_id:118980|Hs108|chr10 (322 aa) initn: 756 init1: 474 opt: 761 Z-score: 938.1 bits: 181.9 E(32554): 6.3e-46 Smith-Waterman score: 761; 39.1% identity (67.6% similar) in 330 aa overlap (20-340:3-322) 10 20 30 40 50 60 pF1KE6 MADTATTASAAAASAASASSDAPPFQLGKPRFQQTSFYGRFRHFLDIIDPRTLFVTERRL .: :.. ::..: .: :: .:::.: ::::.::.::.: CCDS75 MEADLSGFNIDAPRWDQRTFLGRVKHFLNITDPRTVFVSEREL 10 20 30 40 70 80 90 100 110 120 pF1KE6 REAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFGTPIV : ..: . :.. ::. ::: :.:. .. .::::.::. . ::: .: : :. CCDS75 DWAKVMVEKSRMGVVPPGTQVEQLLYAKKLYDSAFHPDTGEKMNVIGRMSFQLP-GGMII 50 60 70 80 90 100 130 140 150 160 170 pF1KE6 VGLLLP-NQTLASTVFWQWLNQSHNACVNYANRNATKPSPASKFIQGYLGAVISAVSIAV .:..: .:. ...::::.::: :: :::.::::..:. . .. .:. :. .::. :: CCDS75 TGFMLQFYRTMPAVIFWQWVNQSFNALVNYTNRNAASPTSVRQMALSYFTATTTAVATAV 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 GLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDSDGNLVG :.:.:..:: : :. :.::: :::.:: :. .:: :: .:: : : . : .: CCDS75 GMNMLTKKA----PP---LVGRWVPFAAVAAANCVNIPMMRQQELIKGICVKDRNENEIG 170 180 190 200 210 240 250 260 270 280 290 pF1KE6 SSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSLV--CLA :. :: .. .....:... : ..: :..: ::: ..: : :.: .. :. CCDS75 HSRRAAAIGITQVVISRITMSAPGMILLPVIMERLEKLHFMQKVKVLHAPLQVMLSGCFL 220 230 240 250 260 270 300 310 320 330 340 pF1KE6 AFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRT------VVYNKGL : .:.: .:::: :. .: :::.. .. ... : .:::: CCDS75 IF--MVPVACGLFPQKCELPVSYLEPKLQDTIKAKYGELEPYVYFNKGL 280 290 300 310 320 >>CCDS7610.1 SFXN4 gene_id:119559|Hs108|chr10 (337 aa) initn: 399 init1: 230 opt: 414 Z-score: 510.9 bits: 102.9 E(32554): 3.9e-22 Smith-Waterman score: 414; 28.4% identity (60.1% similar) in 328 aa overlap (21-340:19-337) 10 20 30 40 50 pF1KE6 MADTATTASAAAASAASASSDA-PPFQLGKPRF---QQTSFYGRFRHFLDIIDPRTLFVT :: : : . :: .. :: :: .. ...:: ..:.. CCDS76 MSLEQEEETQPGRLLGRRDAVPAFIEPNVRFWITERQSFIRRFLQWTELLDPTNVFIS 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 ERRLREAVQLLEDYKHGTLRPGVTNEQLWSAQKIKQAILHPDTNEKIFMPFRMSGYIPFG . .... ::: .. . :. ..... : : . : .:::... : :: ....:: CCDS76 VESIENSRQLLCT-NEDVSSPASADQRIQEAWKRSLATVHPDSSNLIPKLFRPAAFLPFM 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 TPIVVGLLLPNQTLASTVFWQWLNQSHNACVNYANRNAT---KPSPASKFIQGYLGAVIS .: : . : . . :... : . .. : : : : . :: : .. : :: : CCDS76 APTVFLSMTPLKGIKSVILPQVFLCAYMAAFNSINGNRSYTCKPLERSLLMAG---AVAS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 AVSIAVGLNVLVQKANKFTPATRLLIQRFVPFPAVASANICNVVLMRYGELEEGIDVLDS .. ..: . .:: .: :.:..: ...:. :: . : : .:: :.:. CCDS76 STFLGV-IPQFVQMKYGLTGP---WIKRLLPVIFLVQASGMNVYMSRSLESIKGIAVMDK 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 DGNLVGSSKIAARHALLETALTRVVLPMPILVLPPIVMSMLEKTALLQARPRLLLPVQSL .::..: :.::. .:. :: .:.:: ..: . ....: .. : : . .: CCDS76 EGNVLGHSRIAGTKAVRETLASRIVLFGTSALIPEVFTYFFKRTQYFRKNPGSLW-ILKL 240 250 260 270 280 300 310 320 330 340 pF1KE6 VCLA-AFGLALPLAISLFPQMSEIETSQLEPEIAQATSSRTVVYNKGL : . :.:: .:...:.:::...:. .:: .: . : . :..:. CCDS76 SCTVLAMGLMVPFSFSIFPQIGQIQYCSLEEKIQSPTEETEIFYHRGV 290 300 310 320 330 340 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:47:47 2016 done: Tue Nov 8 12:47:48 2016 Total Scan time: 2.190 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]