FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6394, 343 aa 1>>>pF1KE6394 343 - 343 aa - 343 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9630+/-0.000782; mu= 14.3566+/- 0.047 mean_var=92.2341+/-18.529, 0's: 0 Z-trim(110.3): 6 B-trim: 0 in 0/49 Lambda= 0.133545 statistics sampled from 11534 (11535) to 11534 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.354), width: 16 Scan time: 1.760 The best scores are: opt bits E(32554) CCDS1897.1 ASPRV1 gene_id:151516|Hs108|chr2 ( 343) 2267 446.5 1.5e-125 >>CCDS1897.1 ASPRV1 gene_id:151516|Hs108|chr2 (343 aa) initn: 2267 init1: 2267 opt: 2267 Z-score: 2367.4 bits: 446.5 E(32554): 1.5e-125 Smith-Waterman score: 2267; 100.0% identity (100.0% similar) in 343 aa overlap (1-343:1-343) 10 20 30 40 50 60 pF1KE6 MGSPGASLGIKKALQSEQATALPASAPAVSQPTAPAPSCLPKAGQVIPTLLREAPFSSVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 MGSPGASLGIKKALQSEQATALPASAPAVSQPTAPAPSCLPKAGQVIPTLLREAPFSSVI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 APTLLCGFLFLAWVAAEVPEESSRMAGSGARSEEGRRQHAFVPEPFDGANVVPNLWLHSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 APTLLCGFLFLAWVAAEVPEESSRMAGSGARSEEGRRQHAFVPEPFDGANVVPNLWLHSF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 EVINDLNHWDHITKLRFLKESLRGEALGVYNRLSPQDQGDYGTVKEALLKAFGVPGAAPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 EVINDLNHWDHITKLRFLKESLRGEALGVYNRLSPQDQGDYGTVKEALLKAFGVPGAAPS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 HLPKEIVFANSMGKGYYLKGKIGKVPVRFLVDSGAQVSVVHPNLWEEVTDGDLDTLQPFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 HLPKEIVFANSMGKGYYLKGKIGKVPVRFLVDSGAQVSVVHPNLWEEVTDGDLDTLQPFE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 NVVKVANGAEMKILGVWDTAVSLGKLKLKAQFLVANASAEEAIIGTDVLQDHNAILDFEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 NVVKVANGAEMKILGVWDTAVSLGKLKLKAQFLVANASAEEAIIGTDVLQDHNAILDFEH 250 260 270 280 290 300 310 320 330 340 pF1KE6 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSEEGRQELSH ::::::::::::::::::::::::::::::::::::::::::: CCDS18 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSEEGRQELSH 310 320 330 340 343 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:53:06 2016 done: Tue Nov 8 12:53:06 2016 Total Scan time: 1.760 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]