FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6368, 361 aa 1>>>pF1KE6368 361 - 361 aa - 361 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0999+/-0.000323; mu= 17.8941+/- 0.020 mean_var=69.0610+/-14.209, 0's: 0 Z-trim(115.8): 15 B-trim: 0 in 0/50 Lambda= 0.154333 statistics sampled from 26570 (26579) to 26570 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.686), E-opt: 0.2 (0.312), width: 16 Scan time: 5.930 The best scores are: opt bits E(85289) NP_036545 (OMIM: 607065) glutaminyl-peptide cyclot ( 361) 2456 555.7 5.9e-158 >>NP_036545 (OMIM: 607065) glutaminyl-peptide cyclotrans (361 aa) initn: 2456 init1: 2456 opt: 2456 Z-score: 2956.8 bits: 555.7 E(85289): 5.9e-158 Smith-Waterman score: 2456; 100.0% identity (100.0% similar) in 361 aa overlap (1-361:1-361) 10 20 30 40 50 60 pF1KE6 MAGGRHRRVVGTLHLLLLVAALPWASRGVSPSASAWPEEKNYHQPAILNSSALRQIAEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MAGGRHRRVVGTLHLLLLVAALPWASRGVSPSASAWPEEKNYHQPAILNSSALRQIAEGT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 SISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SNIISTLNPTAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 SNIISTLNPTAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 LKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 LKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 MDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 MDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 GVIQDDHIPFLRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_036 GVIQDDHIPFLRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLH 310 320 330 340 350 360 pF1KE6 L : NP_036 L 361 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:32:04 2016 done: Tue Nov 8 12:32:04 2016 Total Scan time: 5.930 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]