FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1802, 313 aa 1>>>pF1KE1802 313 - 313 aa - 313 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8497+/-0.0007; mu= 12.9182+/- 0.042 mean_var=63.9433+/-12.491, 0's: 0 Z-trim(108.9): 15 B-trim: 0 in 0/49 Lambda= 0.160390 statistics sampled from 10499 (10509) to 10499 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.323), width: 16 Scan time: 2.530 The best scores are: opt bits E(32554) CCDS1767.2 SPDYA gene_id:245711|Hs108|chr2 ( 313) 2175 511.6 3.2e-145 CCDS31606.1 SPDYC gene_id:387778|Hs108|chr11 ( 293) 629 153.8 1.5e-37 CCDS45609.1 SPDYE4 gene_id:388333|Hs108|chr17 ( 237) 354 90.2 1.7e-18 CCDS5475.1 SPDYE1 gene_id:285955|Hs108|chr7 ( 336) 281 73.3 2.9e-13 CCDS78241.1 SPDYE5 gene_id:442590|Hs108|chr7 ( 402) 266 69.8 3.9e-12 CCDS78265.1 SPDYE6 gene_id:729597|Hs108|chr7 ( 402) 257 67.8 1.6e-11 CCDS59507.1 SPDYE2B gene_id:100310812|Hs108|chr7 ( 402) 256 67.5 1.9e-11 CCDS34716.2 SPDYE2 gene_id:441273|Hs108|chr7 ( 402) 256 67.5 1.9e-11 >>CCDS1767.2 SPDYA gene_id:245711|Hs108|chr2 (313 aa) initn: 2175 init1: 2175 opt: 2175 Z-score: 2720.6 bits: 511.6 E(32554): 3.2e-145 Smith-Waterman score: 2175; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313) 10 20 30 40 50 60 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKSKRPK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 GPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTISEHTR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 INFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAIVSRR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 CCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRRYVRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 GLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQAYTGSEVVNDHQSNKGKKTNFLK 250 260 270 280 290 300 310 pF1KE1 KDKSMEWFTGSEE ::::::::::::: CCDS17 KDKSMEWFTGSEE 310 >>CCDS31606.1 SPDYC gene_id:387778|Hs108|chr11 (293 aa) initn: 623 init1: 623 opt: 629 Z-score: 787.7 bits: 153.8 E(32554): 1.5e-37 Smith-Waterman score: 629; 48.0% identity (71.8% similar) in 202 aa overlap (67-268:55-254) 40 50 60 70 80 90 pF1KE1 PICKDNWQAFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIA :.:.. ::..:..:...:.:: : : .:. CCDS31 DPTTSPVVTTQVELGGCSRQGGGNGFLRFRQHQEVQAFLSLLEDSFVQEFLSKDPCFQIS 30 40 50 60 70 80 100 110 120 130 140 150 pF1KE1 DKYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKL :::::::..:::.::.. .::.:. ..:.:::::: .::: : : :::::::::.: CCDS31 DKYLLAMVLVYFQRAHLKLSEYTHSSLFLALYLANDMEEDLEGPKCEIFPWALGKDWCLR 90 100 110 120 130 140 160 170 180 190 200 210 pF1KE1 FPNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQ .::. ::.:: :. .::.:::.::::::: : :. : :.: ::.:. : . :. CCDS31 VGKFLHQRDKLWARMGFRAVVSRQCCEEVMAKEPFHWAWTRDRRPHHGGVQRVCPQVPVR 150 160 170 180 190 200 220 230 240 250 260 270 pF1KE1 LPRGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPS :::::. .: :: :: .. :. : :. . ..: : : : :: CCDS31 LPRGPGLSPPHCSPCGLPQHCSSHLLKPVS--SKCPSLTSECHRPPSQNYLSRVKNAWGG 210 220 230 240 250 260 280 290 300 310 pF1KE1 QAYTGSEVVNDHQSNKGKKTNFLKKDKSMEWFTGSEE CCDS31 DFLIVLPPQMQLEPGTYSLRIFPKPPARPGH 270 280 290 >>CCDS45609.1 SPDYE4 gene_id:388333|Hs108|chr17 (237 aa) initn: 327 init1: 237 opt: 354 Z-score: 445.4 bits: 90.2 E(32554): 1.7e-18 Smith-Waterman score: 354; 35.6% identity (65.5% similar) in 194 aa overlap (11-201:46-235) 10 20 30 pF1KE1 MRHNQMCCETPPTVTVYVKSG-SNRSHQP-KKPITLKR-P : .. . :: :..:.. .. . :.: : CCDS45 QPSTTVRSPEVVVDDEVPGPSAPWIDPSPQPQSLGLKRKSEWSDESEEELEEELELERAP 20 30 40 50 60 70 40 50 60 70 80 90 pF1KE1 ICKDNWQAFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIAD .:.: . : . : :: .. .. .... :: .:. : ..: :: : ...: CCDS45 EPEDTW-VVETLCGLKMKLKRKRASSVLPEHHE--AFNRLLGDPVVQKFLAWDKDLRVSD 80 90 100 110 120 130 100 110 120 130 140 150 pF1KE1 KYLLAMTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLF ::::::...::.:: . .. ::.::.:::::. .:::.. : .:: . :::. . CCDS45 KYLLAMVIAYFSRAGLFSWQYQRIHFFLALYLASDMEEDNQAPKQDIFSFLYGKNYSQR- 140 150 160 170 180 190 160 170 180 190 200 210 pF1KE1 PNFLKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQL : : ::: :: . .:. :: . ::..: : :..: :.:.. CCDS45 PLFHKLRYQLLCSMRWRTWVSPEEMEEIQAYDPEHWVWARDRTLIS 200 210 220 230 220 230 240 250 260 270 pF1KE1 PRGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPSQ >>CCDS5475.1 SPDYE1 gene_id:285955|Hs108|chr7 (336 aa) initn: 324 init1: 253 opt: 281 Z-score: 351.5 bits: 73.3 E(32554): 2.9e-13 Smith-Waterman score: 281; 36.1% identity (65.8% similar) in 158 aa overlap (22-179:111-262) 10 20 30 40 50 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTH :..:.. . . .: .. : : : CCDS54 DFNSQLAPGVDPSPPHRSFCWKRKMEWWDKSEESEEEPRKVLAPEP--EEIWVA-EMLCG 90 100 110 120 130 60 70 80 90 100 110 pF1KE1 NNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRA . : :: . .. .... :: .:..: .:. :: : ...:::::::...::.:: CCDS54 LKMKLKRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRA 140 150 160 170 180 190 120 130 140 150 160 170 pF1KE1 KFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRI : .. :..::.:::::: .:::.:..: .:: . ::: :. .: . : : ::. . CCDS54 GFPSWQYQRLHFFLALYLANDMEEDDEDSKQNIFHFLYGKN-RSRIPLLRKRRFQLYRSM 200 210 220 230 240 250 180 190 200 210 220 230 pF1KE1 DYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLC . :: .: CCDS54 NPRARKNRSHIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEE 260 270 280 290 300 310 >>CCDS78241.1 SPDYE5 gene_id:442590|Hs108|chr7 (402 aa) initn: 327 init1: 256 opt: 266 Z-score: 331.4 bits: 69.8 E(32554): 3.9e-12 Smith-Waterman score: 266; 37.6% identity (65.1% similar) in 149 aa overlap (27-175:158-299) 10 20 30 40 50 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS .:.: .. : .. : : : . : CCDS78 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL 130 140 150 160 170 180 60 70 80 90 100 110 pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS :: . .. .... :: .:..: .:. :: : ...:::::::...::.:: : CCDS78 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW 190 200 210 220 230 240 120 130 140 150 160 170 pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI .. ::.::.:::::: .:::.:..: .:: . ::: :. .: . : :: .. :: CCDS78 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYGKN-RSRIPLLRKRWFQLGRSMNPRAR 250 260 270 280 290 300 180 190 200 210 220 230 pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR CCDS78 KKRSRIPLLRKRRFQLGRSMNPRARKNRSRIPLLRKRRFQLGRSMNLRARKNRSQIVLFQ 310 320 330 340 350 360 >>CCDS78265.1 SPDYE6 gene_id:729597|Hs108|chr7 (402 aa) initn: 316 init1: 245 opt: 257 Z-score: 320.2 bits: 67.8 E(32554): 1.6e-11 Smith-Waterman score: 257; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303) 10 20 30 40 50 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS .:.: .. : .. : : : . : CCDS78 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL 130 140 150 160 170 180 60 70 80 90 100 110 pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS :: . .. .... :: .:..: .:. :: : ...:::::::...::.:: : CCDS78 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW 190 200 210 220 230 240 120 130 140 150 160 170 pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI .. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. :: CCDS78 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKRWFQLGHSMNPRAR 250 260 270 280 290 300 180 190 200 210 220 230 pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR .: CCDS78 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKHRFQLYRSMNSRARKNRSQIVLFQ 310 320 330 340 350 360 >>CCDS59507.1 SPDYE2B gene_id:100310812|Hs108|chr7 (402 aa) initn: 316 init1: 245 opt: 256 Z-score: 318.9 bits: 67.5 E(32554): 1.9e-11 Smith-Waterman score: 256; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303) 10 20 30 40 50 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS .:.: .. : .. : : : . : CCDS59 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL 130 140 150 160 170 180 60 70 80 90 100 110 pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS :: . .. .... :: .:..: .:. :: : ...:::::::...::.:: : CCDS59 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW 190 200 210 220 230 240 120 130 140 150 160 170 pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI .. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. :: CCDS59 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRAR 250 260 270 280 290 300 180 190 200 210 220 230 pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR .: CCDS59 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQ 310 320 330 340 350 360 >>CCDS34716.2 SPDYE2 gene_id:441273|Hs108|chr7 (402 aa) initn: 316 init1: 245 opt: 256 Z-score: 318.9 bits: 67.5 E(32554): 1.9e-11 Smith-Waterman score: 256; 36.6% identity (64.1% similar) in 153 aa overlap (27-179:158-303) 10 20 30 40 50 pF1KE1 MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQAFEKNTHNNNKS .:.: .. : .. : : : . : CCDS34 PGVDPSPPHRSFCWKRKMEWWDESEESLEEEPRKVLA---PEPEEIWVA-EMLCGLKMKL 130 140 150 160 170 180 60 70 80 90 100 110 pF1KE1 KRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLAMTFVYFKRAKFTIS :: . .. .... :: .:..: .:. :: : ...:::::::...::.:: : CCDS34 KRRRVSLVLPEHHE--AFNRLLEDPVIKRFLAWDKDLRVSDKYLLAMVIAYFSRAGFPSW 190 200 210 220 230 240 120 130 140 150 160 170 pF1KE1 EHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNFLKLRDQLWDRIDYRAI .. ::.::.:::::: .:::.:..: .:: . :: :. .: . : :: .. :: CCDS34 QYQRIHFFLALYLANDMEEDDEDSKQNIFHFLYRKN-RSRIPLLRKPWFQLGHSMNPRAR 250 260 270 280 290 300 180 190 200 210 220 230 pF1KE1 VSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLPRGPSATPVDCSLCGKKRR .: CCDS34 KNRSRIPLLRKRRFQLYRSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQ 310 320 330 340 350 360 313 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:35:36 2016 done: Sun Nov 6 18:35:36 2016 Total Scan time: 2.530 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]