FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3129, 322 aa 1>>>pF1KE3129 322 - 322 aa - 322 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4531+/-0.000912; mu= 14.0874+/- 0.054 mean_var=51.3617+/-10.275, 0's: 0 Z-trim(102.9): 30 B-trim: 0 in 0/49 Lambda= 0.178959 statistics sampled from 7149 (7162) to 7149 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.22), width: 16 Scan time: 2.500 The best scores are: opt bits E(32554) CCDS1762.1 RBKS gene_id:64080|Hs108|chr2 ( 322) 2060 539.8 1.1e-153 >>CCDS1762.1 RBKS gene_id:64080|Hs108|chr2 (322 aa) initn: 2060 init1: 2060 opt: 2060 Z-score: 2872.6 bits: 539.8 E(32554): 1.1e-153 Smith-Waterman score: 2060; 100.0% identity (100.0% similar) in 322 aa overlap (1-322:1-322) 10 20 30 40 50 60 pF1KE3 MAASGEPQRQWQEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MAASGEPQRQWQEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 QAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 IVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 IVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKTLFNPAP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 AIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 CVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 CVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAV 250 260 270 280 290 300 310 320 pF1KE3 SVQAAGTQSSYPYKKDLPLTLF :::::::::::::::::::::: CCDS17 SVQAAGTQSSYPYKKDLPLTLF 310 320 322 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:34:59 2016 done: Sun Nov 6 18:34:59 2016 Total Scan time: 2.500 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]