FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3019, 124 aa 1>>>pF1KE3019 124 - 124 aa - 124 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9162+/-0.000534; mu= 14.3425+/- 0.032 mean_var=73.7422+/-14.482, 0's: 0 Z-trim(115.7): 7 B-trim: 277 in 1/51 Lambda= 0.149354 statistics sampled from 16219 (16224) to 16219 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.831), E-opt: 0.2 (0.498), width: 16 Scan time: 1.980 The best scores are: opt bits E(32554) CCDS1747.1 UCN gene_id:7349|Hs108|chr2 ( 124) 810 182.1 7.7e-47 >>CCDS1747.1 UCN gene_id:7349|Hs108|chr2 (124 aa) initn: 810 init1: 810 opt: 810 Z-score: 954.4 bits: 182.1 E(32554): 7.7e-47 Smith-Waterman score: 810; 100.0% identity (100.0% similar) in 124 aa overlap (1-124:1-124) 10 20 30 40 50 60 pF1KE3 MRQAGRAALLAALLLLVQLCPGSSQRSPEAAGVQDPSLRWSPGARNQGGGARALLLLLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 MRQAGRAALLAALLLLVQLCPGSSQRSPEAAGVQDPSLRWSPGARNQGGGARALLLLLAE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RFPRRAGPGRLGLGTAGERPRRDNPSLSIDLTFHLLRTLLELARTQSQRERAEQNRIIFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS17 RFPRRAGPGRLGLGTAGERPRRDNPSLSIDLTFHLLRTLLELARTQSQRERAEQNRIIFD 70 80 90 100 110 120 pF1KE3 SVGK :::: CCDS17 SVGK 124 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:36:09 2016 done: Sun Nov 6 18:36:09 2016 Total Scan time: 1.980 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]