FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4130, 527 aa 1>>>pF1KE4130 527 - 527 aa - 527 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1532+/-0.000992; mu= 14.1805+/- 0.059 mean_var=92.5988+/-18.623, 0's: 0 Z-trim(105.9): 65 B-trim: 77 in 1/52 Lambda= 0.133282 statistics sampled from 8618 (8669) to 8618 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.266), width: 16 Scan time: 2.910 The best scores are: opt bits E(32554) CCDS1605.1 TBCE gene_id:6905|Hs108|chr1 ( 527) 3496 682.9 2.4e-196 CCDS73052.1 TBCE gene_id:6905|Hs108|chr1 ( 578) 2049 404.7 1.5e-112 CCDS31692.1 TBCEL gene_id:219899|Hs108|chr11 ( 424) 403 88.1 2.2e-17 >>CCDS1605.1 TBCE gene_id:6905|Hs108|chr1 (527 aa) initn: 3496 init1: 3496 opt: 3496 Z-score: 3638.5 bits: 682.9 E(32554): 2.4e-196 Smith-Waterman score: 3496; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527) 10 20 30 40 50 60 pF1KE4 MSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 CRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPVETIGFDSIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 CRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPVETIGFDSIM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 KQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LEVLNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 LEVLNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 IFISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 IFISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 CKTSMFPSLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 CKTSMFPSLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 SIGQLKTLNKCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 SIGQLKTLNKCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 LCLKYGAPEDWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 LCLKYGAPEDWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSR 430 440 450 460 470 480 490 500 510 520 pF1KE4 LLKVPVSDLLLSYESPKKPGREIELENDLKSLQFYSVENGDCLLVRW ::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 LLKVPVSDLLLSYESPKKPGREIELENDLKSLQFYSVENGDCLLVRW 490 500 510 520 >>CCDS73052.1 TBCE gene_id:6905|Hs108|chr1 (578 aa) initn: 2035 init1: 2035 opt: 2049 Z-score: 2134.2 bits: 404.7 E(32554): 1.5e-112 Smith-Waterman score: 3267; 90.9% identity (90.9% similar) in 559 aa overlap (20-527:20-578) 10 20 30 40 50 60 pF1KE4 MSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFK ::::::::::::::::::::::::::::::::::::::::: CCDS73 MSDTLTADVIGRRVEVNGEHATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 CRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPVETIGFDSIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 CRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPVETIGFDSIM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 KQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRH 130 140 150 160 170 180 190 200 210 220 pF1KE4 LEVLNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITWAE-------------------- :::::::::::::::::::::::::::::::::::::::: CCDS73 LEVLNVSENKLKFPSGSVLTGTLSVLKVLVLNQTGITWAEAHAQCGGSRHGLDMQKDASK 190 200 210 220 230 240 230 240 pF1KE4 -------------------------------VLRCVAGCPGLEELYLESNNIFISERPTD ::::::::::::::::::::::::::::: CCDS73 FVDLCVLQKCSTSNCIISAKDHTSMRMNVAKVLRCVAGCPGLEELYLESNNIFISERPTD 250 260 270 280 290 300 250 260 270 280 290 300 pF1KE4 VLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 VLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIGCKTSMFPSL 310 320 330 340 350 360 310 320 330 340 350 360 pF1KE4 KYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLN 370 380 390 400 410 420 370 380 390 400 410 420 pF1KE4 KCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLKYGAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KCEILPEERRRAELDYRKAFGNEWKQAGGHKDPEKNRLSEEFLTAHPRYQFLCLKYGAPE 430 440 450 460 470 480 430 440 450 460 470 480 pF1KE4 DWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSRLLKVPVSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLEKQLPGSMTIQKVKGLLSRLLKVPVSDL 490 500 510 520 530 540 490 500 510 520 pF1KE4 LLSYESPKKPGREIELENDLKSLQFYSVENGDCLLVRW :::::::::::::::::::::::::::::::::::::: CCDS73 LLSYESPKKPGREIELENDLKSLQFYSVENGDCLLVRW 550 560 570 >>CCDS31692.1 TBCEL gene_id:219899|Hs108|chr11 (424 aa) initn: 293 init1: 137 opt: 403 Z-score: 425.7 bits: 88.1 E(32554): 2.2e-17 Smith-Waterman score: 464; 26.5% identity (58.7% similar) in 453 aa overlap (78-525:6-419) 50 60 70 80 90 100 pF1KE4 KHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIG : .:. .. ..: :. : . . : . CCDS31 MDQPSGRSFMQVLCEKYSPENFPYRRGPGMGVHV- 10 20 30 110 120 130 140 150 160 pF1KE4 NKPVETIGFDSIMKQQSQLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSS :. : : ::.. .: .. . : .:...:::.. .: : .. ..::: : : . CCDS31 --PATPQG--SPMKDRLNLPSV--LVLNSCGITCAGDEKEIAAFCAHVSELDLSDNKLED 40 50 60 70 80 170 180 190 200 210 220 pF1KE4 WDEVIHIADQLRHLEVLNVSENKLKFPSGSVL----TGTLSVLKVLVLNQTGITWAEVLR : :: .:.... .:: ::.: : :.. ::: .:..: .. ::::.. .: : CCDS31 WHEVSKIVSNVPQLEFLNLSSNPLNL---SVLERTCAGSFSGVRKLVLNNSKASWETVHM 90 100 110 120 130 140 230 240 250 260 270 280 pF1KE4 CVAGCPGLEELYLESNNIFISERPTDVLQTVKLLDLSSNQLIDENQLY-LIAHLPRLEQL . : ::::.: :. :. ...::: ...:.: : ... : . .: :. : CCDS31 ILQELPDLEELFLCLNDYETVSCPSICCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDTL 150 160 170 180 190 200 290 300 310 320 330 340 pF1KE4 ILSDTGISSLHFPDAGIGCKTSMFPSLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRN .:... ..... :: ... .::.:. . .. . ...: ...:...:.:. . : CCDS31 VLANNHLNAIEEPDDSLA---RLFPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGI 210 220 230 240 250 260 350 360 370 380 390 400 pF1KE4 PLTKEDKEAETARLLIIASIGQLKTLNKCEILPEERRRAELDYRKAFGNEWKQAGGHKDP :: . .: : :.:: . ... :: . ::. : .. : . .. .. : CCDS31 PLLQP-YTTEERRKLVIARLPSVSKLNGSVVTDGERE----DSERFFIRYYVDVPQEEVP 270 280 290 300 310 410 420 430 440 450 460 pF1KE4 EKNRLSEEFLTAHPRYQFLCLKYGAPEDWELKTQQPLMLKNQLLTLKIKYPHQLDQKVLE : ::. : ::: .:. . :. : . :.. : :: : : CCDS31 --------F-----RYHELITKYG-----KLEPLAEVDLRPQS-SAKVEV-HFNDQ-VEE 320 330 340 350 470 480 490 500 510 520 pF1KE4 KQLPGSMTIQKVKGLLSRLLKVPVSDLLLSYESPKKPGREIELENDLKSLQFYSVENGDC .. ..:. ..: :. :...:.:..:: : . . : :.. . ..:. .....:: CCDS31 MSIRLDQTVAELKKQLKTLVQLPTSNMLLYYFDHEAPFGPEEMKYSSRALHSFGIRDGDK 360 370 380 390 400 410 pF1KE4 LLVRW . : CCDS31 IYVESKTK 420 527 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 03:43:34 2016 done: Sun Nov 6 03:43:34 2016 Total Scan time: 2.910 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]