FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6286, 290 aa 1>>>pF1KE6286 290 - 290 aa - 290 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0427+/-0.00107; mu= 11.4008+/- 0.064 mean_var=68.7379+/-14.178, 0's: 0 Z-trim(102.6): 26 B-trim: 15 in 1/47 Lambda= 0.154695 statistics sampled from 7019 (7022) to 7019 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.59), E-opt: 0.2 (0.216), width: 16 Scan time: 2.280 The best scores are: opt bits E(32554) CCDS1596.1 TSNAX gene_id:7257|Hs108|chr1 ( 290) 1890 431.0 4.9e-121 >>CCDS1596.1 TSNAX gene_id:7257|Hs108|chr1 (290 aa) initn: 1890 init1: 1890 opt: 1890 Z-score: 2286.5 bits: 431.0 E(32554): 4.9e-121 Smith-Waterman score: 1890; 100.0% identity (100.0% similar) in 290 aa overlap (1-290:1-290) 10 20 30 40 50 60 pF1KE6 MSNKEGSGGFRKRKHDNFPHNQRREGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 MSNKEGSGGFRKRKHDNFPHNQRREGKDVNSSSPVMLAFKSFQQELDARHDKYERLVKLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 RDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQVAQELSGEDMHQFHRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 RDITVESKRTIFLLHRITSAPDMEDILTESEIKLDGVRQKIFQVAQELSGEDMHQFHRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 TTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTEDNGKENKTPSSDAQDKQFGTWRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 TTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTTEDNGKENKTPSSDAQDKQFGTWRL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 RVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 RVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTGPYEVS 190 200 210 220 230 240 250 260 270 280 290 pF1KE6 KKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEEGIS :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS15 KKLYTLKQSLAKVENACYALKVRGSEIPKHMLADVFSVKTEMIDQEEGIS 250 260 270 280 290 290 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:47:39 2016 done: Tue Nov 8 11:47:39 2016 Total Scan time: 2.280 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]