FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2089, 764 aa 1>>>pF1KE2089 764 - 764 aa - 764 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3663+/-0.000988; mu= 14.9785+/- 0.059 mean_var=91.8109+/-18.840, 0's: 0 Z-trim(105.0): 57 B-trim: 3 in 1/52 Lambda= 0.133853 statistics sampled from 8131 (8172) to 8131 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.608), E-opt: 0.2 (0.251), width: 16 Scan time: 3.200 The best scores are: opt bits E(32554) CCDS1474.1 PIGR gene_id:5284|Hs108|chr1 ( 764) 5079 991.7 0 CCDS53468.1 FCAMR gene_id:83953|Hs108|chr1 ( 577) 344 77.3 7.7e-14 CCDS41460.1 FCAMR gene_id:83953|Hs108|chr1 ( 265) 327 73.8 3.9e-13 >>CCDS1474.1 PIGR gene_id:5284|Hs108|chr1 (764 aa) initn: 5079 init1: 5079 opt: 5079 Z-score: 5301.7 bits: 991.7 E(32554): 0 Smith-Waterman score: 5079; 100.0% identity (100.0% similar) in 764 aa overlap (1-764:1-764) 10 20 30 40 50 60 pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 FDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 EPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 GVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 NGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 PCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 WYWCGVKQGHFYGETAAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQ 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DPRLFAEEKAVADTRDQADGSRASVDSGSSEEQGGSSRALVSTLVPLGLVLAVGAVAVGV 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 ARARHRKNVDRVSIRSYRTDISMSDFENSREFGANDNMGASSITQETSLGGKEEFVATTE 670 680 690 700 710 720 730 740 750 760 pF1KE2 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA :::::::::::::::::::::::::::::::::::::::::::: CCDS14 STTETKEPKKAKRSSKEEAEMAYKDFLLQSSTVAAEAQDGPQEA 730 740 750 760 >>CCDS53468.1 FCAMR gene_id:83953|Hs108|chr1 (577 aa) initn: 283 init1: 202 opt: 344 Z-score: 361.9 bits: 77.3 E(32554): 7.7e-14 Smith-Waterman score: 344; 45.9% identity (70.6% similar) in 109 aa overlap (24-131:111-219) 10 20 30 40 50 pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK : . :.. :..:.: :.: :.::::: :: CCDS53 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK 90 100 110 120 130 140 60 70 80 90 100 110 pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL :::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::. CCDS53 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 150 160 170 180 190 200 120 130 140 150 160 170 pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY : .. : ....: .: :: CCDS53 GSENNMLFLSMNLTISAGPASTLPTATPAAGELTMRSYGTASPVANRWTPGTTQTLGQGT 210 220 230 240 250 260 >>CCDS41460.1 FCAMR gene_id:83953|Hs108|chr1 (265 aa) initn: 324 init1: 127 opt: 327 Z-score: 349.3 bits: 73.8 E(32554): 3.9e-13 Smith-Waterman score: 327; 45.3% identity (70.8% similar) in 106 aa overlap (24-128:111-216) 10 20 30 40 50 pF1KE2 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRK : . :.. :..:.: :.: :.::::: :: CCDS41 THLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK 90 100 110 120 130 140 60 70 80 90 100 110 pF1KE2 YWCRQGA-RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGL :::: : : : :..:.. :. .: :. ::.::. : ::: ..::: :: : : ::. CCDS41 YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 150 160 170 180 190 200 120 130 140 150 160 170 pF1KE2 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY : .. : ....: .: CCDS41 GSENNMLFLSMNLTISAVLFQKMKAALGPWLLSLPCWPCLCLWLWFYCKGSSGEGGPLRR 210 220 230 240 250 260 764 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:40:57 2016 done: Sun Nov 6 18:40:57 2016 Total Scan time: 3.200 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]