FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1659, 176 aa 1>>>pF1KE1659 176 - 176 aa - 176 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5194+/-0.000748; mu= 10.7341+/- 0.045 mean_var=55.2443+/-10.748, 0's: 0 Z-trim(107.4): 13 B-trim: 3 in 1/50 Lambda= 0.172556 statistics sampled from 9531 (9541) to 9531 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.293), width: 16 Scan time: 1.960 The best scores are: opt bits E(32554) CCDS1470.1 IL20 gene_id:50604|Hs108|chr1 ( 176) 1154 295.0 1.6e-80 CCDS1469.1 IL19 gene_id:29949|Hs108|chr1 ( 177) 457 121.5 2.7e-28 CCDS1468.1 IL19 gene_id:29949|Hs108|chr1 ( 215) 457 121.5 3.2e-28 CCDS1471.1 IL24 gene_id:11009|Hs108|chr1 ( 206) 292 80.4 7.2e-16 CCDS53465.1 IL24 gene_id:11009|Hs108|chr1 ( 207) 292 80.4 7.2e-16 >>CCDS1470.1 IL20 gene_id:50604|Hs108|chr1 (176 aa) initn: 1154 init1: 1154 opt: 1154 Z-score: 1559.3 bits: 295.0 E(32554): 1.6e-80 Smith-Waterman score: 1154; 100.0% identity (100.0% similar) in 176 aa overlap (1-176:1-176) 10 20 30 40 50 60 pF1KE1 MKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVIATNLQEIRNGFSEIRGSVQAKDGNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 MKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVIATNLQEIRNGFSEIRGSVQAKDGNI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 DIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQTPDHYTLRKISSLANSFLTIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 DIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQTPDHYTLRKISSLANSFLTIK 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 KDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKALGELDILLQWMEETE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 KDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKALGELDILLQWMEETE 130 140 150 160 170 >>CCDS1469.1 IL19 gene_id:29949|Hs108|chr1 (177 aa) initn: 436 init1: 403 opt: 457 Z-score: 621.5 bits: 121.5 E(32554): 2.7e-28 Smith-Waterman score: 457; 40.2% identity (72.4% similar) in 174 aa overlap (1-174:1-169) 10 20 30 40 50 60 pF1KE1 MKASSLAFSLLSAAFYLLWTPSTGLKTLNLGSCVIATNLQEIRNGFSEIRGSVQAKDGNI :: . ... ::.. . : . . ::. :.:.:....:...:.::. ..:::: CCDS14 MKLQCVSLWLLGTILILCSVDNHGLRR-----CLISTDMHHIEESFQEIKRAIQAKDTFP 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 DIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQTPDHYTLRKISSLANSFLTIK .. :: :.:: :: . ::. ..:: .:.:::::..: :. ::::::.::::: .. CCDS14 NVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKDHQEPNPKILRKISSIANSFLYMQ 60 70 80 90 100 110 130 140 150 160 170 pF1KE1 KDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKALGELDILLQWMEETE : :: :. . ::: .:: . : .....:: .::..:.:::::..: :... CCDS14 KTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMF 120 130 140 150 160 170 CCDS14 SA >>CCDS1468.1 IL19 gene_id:29949|Hs108|chr1 (215 aa) initn: 436 init1: 403 opt: 457 Z-score: 620.1 bits: 121.5 E(32554): 3.2e-28 Smith-Waterman score: 457; 40.2% identity (72.4% similar) in 174 aa overlap (1-174:39-207) 10 20 30 pF1KE1 MKASSLAFSLLSAAFYLLWTPSTGLKTLNL :: . ... ::.. . : . . ::. CCDS14 HRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLGTILILCSVDNHGLRR--- 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 GSCVIATNLQEIRNGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLY :.:.:....:...:.::. ..:::: .. :: :.:: :: . ::. ..:: .: CCDS14 --CLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFY 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 LDRVFKNYQTPDHYTLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAMKKYSQILSHFE .:::::..: :. ::::::.::::: ..: :: :. . ::: .:: . : .... CCDS14 VDRVFKDHQEPNPKILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYD 130 140 150 160 170 180 160 170 pF1KE1 KLEPQAAVVKALGELDILLQWMEETE .:: .::..:.:::::..: :... CCDS14 QLEVHAAAIKSLGELDVFLAWINKNHEVMFSA 190 200 210 >>CCDS1471.1 IL24 gene_id:11009|Hs108|chr1 (206 aa) initn: 251 init1: 149 opt: 292 Z-score: 398.4 bits: 80.4 E(32554): 7.2e-16 Smith-Waterman score: 292; 33.1% identity (68.1% similar) in 163 aa overlap (17-174:41-202) 10 20 30 40 pF1KE1 MKASSLAFSLLSAAFYLLWTPSTGLK--TLNLGSCVIATNL-QEIR :::. .: . ...: : . . :.. CCDS14 WTLARPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPCQVKGVVPQKLW 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE1 NGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQ--TP ..: .. ..::.:. . :.:.. : ::... :. : :.. ::..:: :::::. : CCDS14 EAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESCYLVHTLLEFYLKTVFKNYHNRTV 80 90 100 110 120 110 120 130 140 150 160 pF1KE1 DHYTLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKA . ::...:.:::.:. : ..:. . . . : ... . :..:. .::..:: CCDS14 EVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQLDVEAALTKA 130 140 150 160 170 180 170 pF1KE1 LGELDILLQWMEETE :::.:::: ::.. CCDS14 LGEVDILLTWMQKFYKL 190 200 >>CCDS53465.1 IL24 gene_id:11009|Hs108|chr1 (207 aa) initn: 251 init1: 149 opt: 292 Z-score: 398.4 bits: 80.4 E(32554): 7.2e-16 Smith-Waterman score: 292; 33.1% identity (68.1% similar) in 163 aa overlap (17-174:42-203) 10 20 30 40 pF1KE1 MKASSLAFSLLSAAFYLLWTPSTGLK--TLNLGSCVIATNL-QEIR :::. .: . ...: : . . :.. CCDS53 TLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPCQVKGVVPQKLW 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE1 NGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNYQ--TP ..: .. ..::.:. . :.:.. : ::... :. : :.. ::..:: :::::. : CCDS53 EAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESCYLVHTLLEFYLKTVFKNYHNRTV 80 90 100 110 120 130 110 120 130 140 150 160 pF1KE1 DHYTLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKA . ::...:.:::.:. : ..:. . . . : ... . :..:. .::..:: CCDS53 EVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQLDVEAALTKA 140 150 160 170 180 190 170 pF1KE1 LGELDILLQWMEETE :::.:::: ::.. CCDS53 LGEVDILLTWMQKFYKL 200 176 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:41:35 2016 done: Sun Nov 6 18:41:35 2016 Total Scan time: 1.960 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]