(Linear) (Six-base) MAPSORT of: KIEE9409.seq Check: 5931 from: 1 to: 1083 KIEE9409.orf With 182 enzymes: SgfI * December 27, 2011 16:39 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 886 1083 Size: 886 197 AccI GT'mk_AC Cuts at: 0 119 527 1083 Size: 119 408 556 Fragments arranged by size: 556 408 119 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 762 1083 Size: 762 321 AleI CACnn'nnGTG Cuts at: 0 757 1083 Size: 757 326 AlwNI CAG_nnn'CTG Cuts at: 0 546 1083 Size: 546 537 ApaI G_GGCC'C Cuts at: 0 208 714 1053 1083 Size: 208 506 339 30 Fragments arranged by size: 506 339 208 30 AvaI C'yCGr_G Cuts at: 0 30 54 433 947 1083 Size: 30 24 379 514 136 Fragments arranged by size: 514 379 136 30 24 BaeI ACnnnnGTAyCnnnnnnn_nnnnn' Cuts at: 0 215 248 1083 Size: 215 33 835 Fragments arranged by size: 835 215 33 BanII G_rGCy'C Cuts at: 0 17 25 208 584 714 766 948 1053 Size: 17 8 183 376 130 52 182 105 Cuts at: 1053 1083 Size: 30 Fragments arranged by size: 376 183 182 130 105 52 30 17 8 BbsI GAAGACnn'nnnn_ Cuts at: 0 789 1083 Size: 789 294 BbvCI CC'TCA_GC Cuts at: 0 604 1083 Size: 604 479 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 429 463 688 720 722 754 1083 Size: 429 34 225 32 2 32 329 Fragments arranged by size: 429 329 225 34 32 32 2 BciVI GTATCCnnnnn_n' Cuts at: 0 216 1083 Size: 216 867 BglI GCCn_nnn'nGGC Cuts at: 0 164 292 572 790 1083 Size: 164 128 280 218 293 Fragments arranged by size: 293 280 218 164 128 BlpI GC'TnA_GC Cuts at: 0 340 1002 1083 Size: 340 662 81 Fragments arranged by size: 662 340 81 Bme1580I G_kGCm'C Cuts at: 0 208 364 714 838 1053 1083 Size: 208 156 350 124 215 30 Fragments arranged by size: 350 215 208 156 124 30 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 600 1083 Size: 600 483 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 39 91 100 1002 1083 Size: 39 52 9 902 81 Fragments arranged by size: 902 81 52 39 9 Bpu10I CC'TnA_GC Cuts at: 0 604 1083 Size: 604 479 BsaAI yAC'GTr Cuts at: 0 702 1083 Size: 702 381 BsaHI Gr'CG_yC Cuts at: 0 485 1083 Size: 485 598 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 88 592 999 1083 Size: 88 504 407 84 Fragments arranged by size: 504 407 88 84 BseYI C'CCAG_C Cuts at: 0 25 162 857 1083 Size: 25 137 695 226 Fragments arranged by size: 695 226 137 25 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 220 1083 Size: 220 863 BsiEI CG_ry'CG Cuts at: 0 95 309 694 981 1083 Size: 95 214 385 287 102 Fragments arranged by size: 385 287 214 102 95 BsiHKAI G_wGCw'C Cuts at: 0 269 754 1083 Size: 269 485 329 Fragments arranged by size: 485 329 269 Bsp1286I G_dGCh'C Cuts at: 0 17 25 208 269 364 584 714 754 Size: 17 8 183 61 95 220 130 40 Cuts at: 754 766 838 948 1053 1083 Size: 12 72 110 105 30 Fragments arranged by size: 220 183 130 110 105 95 72 61 40 30 17 12 8 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 110 886 1083 Size: 110 776 197 Fragments arranged by size: 776 197 110 BsrBI CCG'CTC Cuts at: 0 912 935 1083 Size: 912 23 148 Fragments arranged by size: 912 148 23 BsrDI GCAATG_nn' Cuts at: 0 869 1083 Size: 869 214 BsrFI r'CCGG_y Cuts at: 0 508 976 1083 Size: 508 468 107 Fragments arranged by size: 508 468 107 BssHII G'CGCG_C Cuts at: 0 377 464 1083 Size: 377 87 619 Fragments arranged by size: 619 377 87 BssSI C'ACGA_G Cuts at: 0 474 1083 Size: 474 609 BstAPI GCAn_nnn'nTGC Cuts at: 0 368 546 1083 Size: 368 178 537 Fragments arranged by size: 537 368 178 BstXI CCAn_nnnn'nTGG Cuts at: 0 882 1083 Size: 882 201 BtgI C'CryG_G Cuts at: 0 152 208 287 419 494 1083 Size: 152 56 79 132 75 589 Fragments arranged by size: 589 152 132 79 75 56 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 338 1083 Size: 338 745 BtsI GCAGTG_nn' Cuts at: 0 445 1064 1083 Size: 445 619 19 Fragments arranged by size: 619 445 19 EaeI y'GGCC_r Cuts at: 0 92 191 306 313 416 506 691 978 Size: 92 99 115 7 103 90 185 287 Cuts at: 978 1083 Size: 105 Fragments arranged by size: 287 185 115 105 103 99 92 90 7 EagI C'GGCC_G Cuts at: 0 92 306 691 978 1083 Size: 92 214 385 287 105 Fragments arranged by size: 385 287 214 105 92 EarI CTCTTCn'nnn_ Cuts at: 0 661 1083 Size: 661 422 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 39 91 100 762 1002 1083 Size: 39 52 9 662 240 81 Fragments arranged by size: 662 240 81 52 39 9 EcoO109I rG'GnC_Cy Cuts at: 0 99 204 600 861 962 1083 Size: 99 105 396 261 101 121 Fragments arranged by size: 396 261 121 105 101 99 FseI GG_CCGG'CC Cuts at: 0 512 1083 Size: 512 571 FspI TGC'GCA Cuts at: 0 451 730 1083 Size: 451 279 353 Fragments arranged by size: 451 353 279 HaeII r_GCGC'y Cuts at: 0 43 301 502 785 823 853 955 1083 Size: 43 258 201 283 38 30 102 128 Fragments arranged by size: 283 258 201 128 102 43 38 30 HincII GTy'rAC Cuts at: 0 894 1083 Size: 894 189 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 41 1083 Size: 41 1042 MslI CAynn'nnrTG Cuts at: 0 400 757 1083 Size: 400 357 326 Fragments arranged by size: 400 357 326 MspA1I CmG'CkG Cuts at: 0 210 250 279 289 311 828 899 1083 Size: 210 40 29 10 22 517 71 184 Fragments arranged by size: 517 210 184 71 40 29 22 10 NaeI GCC'GGC Cuts at: 0 510 1083 Size: 510 573 NgoMIV G'CCGG_C Cuts at: 0 508 1083 Size: 508 575 NotI GC'GGCC_GC Cuts at: 0 306 1083 Size: 306 777 PasI CC'CwG_GG Cuts at: 0 44 1083 Size: 44 1039 PmlI CAC'GTG Cuts at: 0 702 1083 Size: 702 381 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 1054 1083 Size: 1054 29 PpuMI rG'GwC_Cy Cuts at: 0 99 1083 Size: 99 984 PspOMI G'GGCC_C Cuts at: 0 204 710 1049 1083 Size: 204 506 339 34 Fragments arranged by size: 506 339 204 34 PspXI vC'TCGA_Gb Cuts at: 0 433 1083 Size: 433 650 PvuII CAG'CTG Cuts at: 0 250 899 1083 Size: 250 649 184 Fragments arranged by size: 649 250 184 SacII CC_GC'GG Cuts at: 0 211 290 1083 Size: 211 79 793 Fragments arranged by size: 793 211 79 SmaI CCC'GGG Cuts at: 0 32 949 1083 Size: 32 917 134 Fragments arranged by size: 917 134 32 SmlI C'TyrA_G Cuts at: 0 433 1083 Size: 433 650 SrfI GCCC'GGGC Cuts at: 0 949 1083 Size: 949 134 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 553 585 1083 Size: 553 32 498 Fragments arranged by size: 553 498 32 XhoI C'TCGA_G Cuts at: 0 433 1083 Size: 433 650 XmaI C'CCGG_G Cuts at: 0 30 947 1083 Size: 30 917 136 Fragments arranged by size: 917 136 30 Enzymes that do cut: AarI AccI AcuI AleI AlwNI ApaI AvaI BaeI BanII BbsI BbvCI BcgI BciVI BglI BlpI Bme1580I BplI BpmI Bpu10I BsaAI BsaHI BseRI BseYI BsgI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrDI BsrFI BssHII BssSI BstAPI BstXI BtgI BtgZI BtsI EaeI EagI EarI Eco57MI EcoO109I FseI FspI HaeII HincII MmeI MslI MspA1I NaeI NgoMIV NotI PasI PmlI PpiI PpuMI PspOMI PspXI PvuII SacII SmaI SmlI SrfI TstI XhoI XmaI Enzymes that do not cut: AatII Acc65I AclI AfeI AflII AflIII AgeI AhdI AlfI AloI ApaLI ApoI AscI AseI AsiSI AvrII BamHI BanI BbeI BclI BfrBI BglII BmgBI BmrI BmtI BpuEI BsaI BsaBI BsaWI BsaXI BsiWI BsmI BsmBI BspEI BspHI BsrGI BstBI BstEII BstYI BstZ17I Bsu36I ClaI CspCI DraI DraIII DrdI EciI EcoICRI EcoNI EcoRI EcoRV FalI FspAI Hin4I HindIII HpaI KasI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NruI NsiI NspI PacI PciI PflMI PfoI PmeI PshAI PsiI PsrI PstI PvuI RsrII SacI SalI SanDI SapI SbfI ScaI SexAI SfcI SfiI SfoI SgfI SgrAI SnaBI SpeI SphI SspI StuI StyI SwaI TaqII TatI Tth111I XbaI XcmI XmnI ZraI